RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 GNAI2P04899 355 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 SP9P0CG40 484 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 FDX1P10109 184 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 BMP3P12645 472 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 RASA1P20936 1047 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 ARHGAP1Q07960 439 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 DMWDQ09019 674 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 MFSD10Q14728 455 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 DUSP6Q16828 381 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 KIAA0753Q2KHM9 967 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 PPM1JQ5JR12 505 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 SLC9C2Q5TAH2 1124 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 ANKRD54Q6NXT1 300 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 CCDC62Q6P9F0 684 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 TMED8Q6PL24 325 aaPredicted RBP8.67□□□□□ -1.02
COL9A1-209ENST00000489861 TMEM184AQ6ZMB5 413 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 DENND4AQ7Z401 1863 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 RPAP2Q8IXW5 612 aaPredicted RBP8.67□□□□□ -1.02
COL9A1-209ENST00000489861 CHMP4CQ96CF2 233 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 CCDC8Q9H0W5 538 aaPredicted RBP8.67□□□□□ -1.02
COL9A1-209ENST00000489861 ZNF532Q9HCE3 1301 aa8.67□□□□□ -1.02
COL9A1-209ENST00000489861 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
COL9A1-209ENST00000489861 ADD3Q9UEY8 706 aaKnown RBP8.67□□□□□ -1.02
COL9A1-209ENST00000489861 NOB1Q9ULX3 412 aaKnown RBP8.67□□□□□ -1.02
COL9A1-209ENST00000489861 LOC102724159A0A0B4J2E5 919 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 PRR5-ARHGAP8B1AHC4 643 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 NFIBO00712 420 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 DGKIO75912 1065 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 CTSHP09668 335 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 ZNF286BP0CG31 522 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 CASTP20810 708 aaKnown RBP8.66□□□□□ -1.02
COL9A1-209ENST00000489861 TGM1P22735 817 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 EDNRBP24530 442 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 TECP42680 631 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 STAT2P52630 851 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 ARHGAP8P85298 464 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 PDE4DQ08499 809 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 PWP2Q15269 919 aaKnown RBP8.66□□□□□ -1.02
COL9A1-209ENST00000489861 LY6KQ17RY6 165 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 NAALADL2Q58DX5 795 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
COL9A1-209ENST00000489861 SLC30A10Q6XR72 485 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 CHST3Q7LGC8 479 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 MKL1Q969V6 931 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 EAF2Q96CJ1 260 aaPredicted RBP8.66□□□□□ -1.02
COL9A1-209ENST00000489861 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
COL9A1-209ENST00000489861 FNDC1Q4ZHG4 1894 aaPredicted RBP8.66□□□□□ -1.02
COL9A1-209ENST00000489861 IGSF10Q6WRI0 2623 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 MYH7P12883 1935 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 MIA3Q5JRA6 1907 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 PPFIA3O75145 1194 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 F2P00734 622 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 GH1P01241 217 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 RARSP54136 660 aaKnown RBP8.65□□□□□ -1.02
COL9A1-209ENST00000489861 ERVFC1P60507 584 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 OS9Q13438 667 aaPredicted RBP8.65□□□□□ -1.02
COL9A1-209ENST00000489861 DGKDQ16760 1214 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 DIEXFQ68CQ4 756 aaKnown RBP8.65□□□□□ -1.02
COL9A1-209ENST00000489861 SLFN13Q68D06 897 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 CTR9Q6PD62 1173 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 ZC3H14Q6PJT7 736 aaKnown RBP8.65□□□□□ -1.02
COL9A1-209ENST00000489861 SIX5Q8N196 739 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 STK11IPQ8N1F8 1099 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 GMCL1P1Q8NEA9 526 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 NCDNQ9UBB6 729 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 CCPG1Q9ULG6 757 aa8.65□□□□□ -1.02
COL9A1-209ENST00000489861 SDK1Q7Z5N4 2213 aa8.65□□□□□ -1.03
COL9A1-209ENST00000489861 AKAP13Q12802 2813 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 ITPR1Q14643 2758 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 ZBED9Q6R2W3 1325 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 ENPP3O14638 875 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 MBD4O95243 580 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 WEE2P0C1S8 567 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 MS4A1P11836 297 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 LMNB2Q03252 620 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 LLGL2Q6P1M3 1020 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 RASGRP2Q7LDG7 609 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 FAM160B2Q86V87 743 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 DHX37Q8IY37 1157 aaKnown RBP8.64□□□□□ -1.03
COL9A1-209ENST00000489861 FTSJ3Q8IY81 847 aaKnown RBP8.64□□□□□ -1.03
COL9A1-209ENST00000489861 MAML2Q8IZL2 1156 aaPredicted RBP8.64□□□□□ -1.03
COL9A1-209ENST00000489861 ZDHHC14Q8IZN3 488 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 MICAL1Q8TDZ2 1067 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 CHURC1Q8WUH1 139 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 CEP95Q96GE4 821 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 CHMP4BQ9H444 224 aaKnown RBP8.64□□□□□ -1.03
COL9A1-209ENST00000489861 PARD6AQ9NPB6 346 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 DLGAP2Q9P1A6 1054 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 ANGPTL2Q9UKU9 493 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 PRR12Q9ULL5 1215 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 ISY1Q9ULR0 285 aaKnown RBP8.64□□□□□ -1.03
COL9A1-209ENST00000489861 C2orf16Q68DN1 1984 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 DMXL2Q8TDJ6 3036 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 PATJQ8NI35 1801 aa8.64□□□□□ -1.03
COL9A1-209ENST00000489861 DOCK8Q8NF50 2099 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 PTPDC1A2A3K4 754 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 KRBA1A5PL33 1030 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 POTEMA6NI47 508 aa8.63□□□□□ -1.03
COL9A1-209ENST00000489861 CYSRT1A8MQ03 144 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms