RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 KCNJ14Q9UNX9 436 aa17.96■□□□□ 0.47
LMX1A-204ENST00000489443 MAFGO15525 162 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 B4GALT4O60513 344 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 ARP10275 920 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 KCNA2P16389 499 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 ITGB8P26012 769 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 PSEN2P49810 448 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 HABP4Q5JVS0 413 aaKnown RBP17.95■□□□□ 0.46
LMX1A-204ENST00000489443 NFRKBQ6P4R8 1299 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 BLIDQ8IZY5 108 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 ALG1Q9BT22 464 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 PRO3102Q9H379 93 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 TELO2Q9Y4R8 837 aa17.95■□□□□ 0.46
LMX1A-204ENST00000489443 LTBP2Q14767 1821 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 MEIS1O00470 390 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 CYP3A4P08684 503 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
LMX1A-204ENST00000489443 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
LMX1A-204ENST00000489443 XBP1P17861 261 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 BMP8BP34820 402 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 RABEP1Q15276 862 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 NSUN7Q8NE18 718 aaKnown RBP17.94■□□□□ 0.46
LMX1A-204ENST00000489443 WASF1Q92558 559 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 GPR20Q99678 358 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
LMX1A-204ENST00000489443 TRMT13Q9NUP7 481 aaKnown RBP17.94■□□□□ 0.46
LMX1A-204ENST00000489443 LAMA2P24043 3122 aaKnown RBP17.94■□□□□ 0.46
LMX1A-204ENST00000489443 FAM86B1E9PN63 330 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 JAK2O60674 1132 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 F2P00734 622 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 TIMP1P01033 207 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 FAM86B2P0C5J1 330 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 MFSD10Q14728 455 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 KIAA0753Q2KHM9 967 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 UTP14CQ5TAP6 766 aaKnown RBP17.93■□□□□ 0.46
LMX1A-204ENST00000489443 GALNT17Q6IS24 598 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 CCDC83Q8IWF9 413 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
LMX1A-204ENST00000489443 CRYGNQ8WXF5 182 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 ZSCAN31Q96LW9 406 aaPredicted RBP17.93■□□□□ 0.46
LMX1A-204ENST00000489443 UIMC1Q96RL1 719 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 KATNAL1Q9BW62 490 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 PPP1R12CQ9BZL4 782 aa17.93■□□□□ 0.46
LMX1A-204ENST00000489443 LGALS2P05162 132 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 SUPT20HL2P0C7V6 817 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 CYP2C9P11712 490 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 CYP2C18P33260 490 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 PTPN11Q06124 597 aaPredicted RBP17.92■□□□□ 0.46
LMX1A-204ENST00000489443 ST3GAL1Q11201 340 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 NPY5RQ15761 445 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 NIPA1Q7RTP0 329 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 DAGLBQ8NCG7 672 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 TBC1D32Q96NH3 1257 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 SDF4Q9BRK5 362 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 C16orf70Q9BSU1 422 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 PHF20Q9BVI0 1012 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 HIPK3Q9H422 1215 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 AGO4Q9HCK5 861 aaKnown RBP17.92■□□□□ 0.46
LMX1A-204ENST00000489443 NOD1Q9Y239 953 aa17.92■□□□□ 0.46
LMX1A-204ENST00000489443 H3BRB1 525 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 HAS3O00219 553 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 ST18O60284 1047 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 TCF7P36402 384 aaPredicted RBP17.91■□□□□ 0.46
LMX1A-204ENST00000489443 FOSBP53539 338 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 ITGB3BPQ13352 177 aaPredicted RBP17.91■□□□□ 0.46
LMX1A-204ENST00000489443 PRR16Q569H4 304 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 TBCKQ8TEA7 893 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 SEPT1Q8WYJ6 367 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 TUT1Q9H6E5 874 aaKnown RBP17.91■□□□□ 0.46
LMX1A-204ENST00000489443 JPH1Q9HDC5 661 aaPredicted RBP17.91■□□□□ 0.46
LMX1A-204ENST00000489443 SH2B1Q9NRF2 756 aaPredicted RBP17.91■□□□□ 0.46
LMX1A-204ENST00000489443 HDAC6Q9UBN7 1215 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 SLC9A2Q9UBY0 812 aa17.91■□□□□ 0.46
LMX1A-204ENST00000489443 TRIP12Q14669 1992 aaPredicted RBP17.9■□□□□ 0.46
LMX1A-204ENST00000489443 IGLV3-22A0A075B6J6 115 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 GSTTP1A0A1W2PQM5 241 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 M0R2N6 131 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 USP11P51784 963 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 PTGISQ16647 500 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 GDF6Q6KF10 455 aaPredicted RBP17.9■□□□□ 0.46
LMX1A-204ENST00000489443 TRIM50Q86XT4 487 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 NOC4LQ9BVI4 516 aaKnown RBP17.9■□□□□ 0.46
LMX1A-204ENST00000489443 NFASCO94856 1347 aa17.9■□□□□ 0.46
LMX1A-204ENST00000489443 CCDC194A0A1B0GVG4 234 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 DDX39AO00148 427 aaKnown RBP17.89■□□□□ 0.45
LMX1A-204ENST00000489443 IPO5O00410 1097 aaKnown RBP17.89■□□□□ 0.45
LMX1A-204ENST00000489443 CIITAP33076 1130 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 FPGSQ05932 587 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 NONOQ15233 471 aaKnown RBP eCLIP17.89■□□□□ 0.45
LMX1A-204ENST00000489443 MFSD5Q6N075 450 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 SESTD1Q86VW0 696 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 TDHQ8IZJ6 230 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 OXER1Q8TDS5 423 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 ZNF577Q9BSK1 485 aa17.89■□□□□ 0.45
LMX1A-204ENST00000489443 GTF2IRD1Q9UHL9 959 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms