RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TNNT1P13805 278 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 IREB2P48200 963 aaKnown RBP9.49□□□□□ -0.89
VTI1A-207ENST00000489357 PAK1Q13153 545 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 PICALMQ13492 652 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 MTMR2Q13614 643 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 NR1I3Q14994 352 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 SEPT2Q15019 361 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 IL17AQ16552 155 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 INF2Q27J81 1249 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 NOL9Q5SY16 702 aaKnown RBP9.49□□□□□ -0.89
VTI1A-207ENST00000489357 DCAF15Q66K64 600 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 ARMCX5Q6P1M9 558 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 USP17L2Q6R6M4 530 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 RASAL3Q86YV0 1011 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 ANKRD13AQ8IZ07 590 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 GMCL1P1Q8NEA9 526 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 CUL5Q93034 780 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 IQCDQ96DY2 449 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 GMCL1Q96IK5 515 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 CLMNQ96JQ2 1002 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 PANX2Q96RD6 677 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 ZNF341Q9BYN7 854 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 DNAJC18Q9H819 358 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 HERC5Q9UII4 1024 aaKnown RBP9.49□□□□□ -0.89
VTI1A-207ENST00000489357 PCNTO95613 3336 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 DOCK1Q14185 1865 aa9.49□□□□□ -0.89
VTI1A-207ENST00000489357 BICDL2A1A5D9 508 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 PSMA7O14818 248 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 TPM1P09493 284 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 AKR1B1P15121 316 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 EEF1GP26641 437 aaKnown RBP9.48□□□□□ -0.89
VTI1A-207ENST00000489357 AFMP43652 599 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 AP3B2Q13367 1082 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 RRP1BQ14684 758 aaKnown RBP9.48□□□□□ -0.89
VTI1A-207ENST00000489357 QPCTQ16769 361 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 SLC4A8Q2Y0W8 1093 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-207ENST00000489357 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 ISM2Q6H9L7 571 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 MIGA2Q7L4E1 593 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 KIF18AQ8NI77 898 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 CALML4Q96GE6 196 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 DHTKD1Q96HY7 919 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-207ENST00000489357 MTMR9Q96QG7 549 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 PIGSQ96S52 555 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 SPSB2Q99619 263 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 C7orf25Q9BPX7 421 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 ADD3Q9UEY8 706 aaKnown RBP9.48□□□□□ -0.89
VTI1A-207ENST00000489357 LIMA1Q9UHB6 759 aaKnown RBP9.48□□□□□ -0.89
VTI1A-207ENST00000489357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.48□□□□□ -0.895e-6■■■□□ 17
VTI1A-207ENST00000489357 SNCAIPQ9Y6H5 919 aa9.48□□□□□ -0.89
VTI1A-207ENST00000489357 PVALEFA0A1B0GWK0 134 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 CCNT1O60563 726 aaKnown RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 GOLGA8HP0CJ92 632 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 ZBTB48P10074 688 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 INPP5BP32019 993 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 TM4SF4P48230 202 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 USP11P51784 963 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 MAP2K1Q02750 393 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 NOGQ13253 232 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 PRKG1Q13976 671 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 VGLL4Q14135 290 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 CERKLQ49MI3 558 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 NAALADL2Q58DX5 795 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 CABP7Q86V35 215 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 CNGA4Q8IV77 575 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 FAM114A1Q8IWE2 563 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 GIMAP8Q8ND71 665 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 RASSF8Q8NHQ8 419 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 TBCKQ8TEA7 893 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 USB1Q9BQ65 265 aaKnown RBP9.47□□□□□ -0.89
VTI1A-207ENST00000489357 THAP9Q9H5L6 903 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 JMJD4Q9H9V9 463 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 KDM3AQ9Y4C1 1321 aa9.47□□□□□ -0.89
VTI1A-207ENST00000489357 TBX3O15119 743 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 TLL1O43897 1013 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 ADH1BP00325 375 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 FOSP01100 380 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-207ENST00000489357 PBX1P40424 430 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 JAG1P78504 1218 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 PSMD2Q13200 908 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 CALCRLQ16602 461 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 LETM2Q2VYF4 491 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 E4F1Q66K89 784 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-207ENST00000489357 PPP2R2DQ66LE6 453 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 BTNL9Q6UXG8 535 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 APTXQ7Z2E3 356 aaKnown RBP9.46□□□□□ -0.9
VTI1A-207ENST00000489357 RETREG3Q86VR2 466 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 HOMER1Q86YM7 354 aa9.46□□□□□ -0.9
VTI1A-207ENST00000489357 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms