RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 FBXO46Q6PJ61 603 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 PAOXQ6QHF9 649 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 LMBR1LQ6UX01 489 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 SP8Q8IXZ3 490 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 SREK1Q8WXA9 508 aaKnown RBP9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 SUCLG2Q96I99 432 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 MPHOSPH8Q99549 860 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 GREM2Q9H772 168 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 REV1Q9UBZ9 1251 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 ATP6V0A2Q9Y487 856 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 CORINQ9Y5Q5 1042 aa9.92□□□□□ -0.82
TRAPPC12-221ENST00000489032 PPIP5K2O43314 1243 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 GNAI2P04899 355 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 NFICP08651 508 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 FOXO4P98177 505 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 CLCQ05315 142 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 CXCL9Q07325 125 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 LRRFIP1Q32MZ4 808 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 BEND4Q6ZU67 534 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 FAM20CQ8IXL6 584 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 SUPT20HQ8NEM7 779 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 PANK1Q8TE04 598 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 CELF1Q92879 486 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 ISL2Q96A47 359 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 MEIS3Q99687 375 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 SRRTQ9BXP5 876 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 BICC1Q9H694 974 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 ACSS3Q9H6R3 686 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 EHMT1Q9H9B1 1298 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 TNNQ9UQP3 1299 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 MYH3P11055 1940 aa9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 MKI67P46013 3256 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-221ENST00000489032 PLIN1O60240 522 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 ATE1O95260 518 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 YARSP54577 528 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 DPP8Q6V1X1 898 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 ARMC10Q8N2F6 343 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 GMLQ99445 158 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 VPS33BQ9H267 617 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 KLHL3Q9UH77 587 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 ZNRF3Q9ULT6 936 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 PPT2Q9UMR5 302 aa9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.82
TRAPPC12-221ENST00000489032 H7C1D1 291 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 RRP1P56182 461 aaKnown RBP9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 MVPQ14764 893 aaKnown RBP9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 AOC3Q16853 763 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 RABL6Q3YEC7 729 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 SLC6A19Q695T7 634 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 CCDC81Q6ZN84 652 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 KRT26Q7Z3Y9 468 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 CLEC10AQ8IUN9 316 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 FAM13CQ8NE31 585 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 GIMAP7Q8NHV1 300 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 DRC1Q96MC2 740 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 SEMA6CQ9H3T2 930 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 CNNM1Q9NRU3 951 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 STOML1Q9UBI4 398 aa9.89□□□□□ -0.83
TRAPPC12-221ENST00000489032 TNIP1Q15025 636 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 TMEM201Q5SNT2 666 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 DLK2Q6UY11 383 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 LDHAL6AQ6ZMR3 332 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 EZH1Q92800 747 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 KAZALD1Q96I82 304 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 CNOT7Q9UIV1 285 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 RAXQ9Y2V3 346 aa9.88□□□□□ -0.83
TRAPPC12-221ENST00000489032 POLR2AP24928 1970 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 KCNJ4P48050 445 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 GSK3AP49840 483 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 CHMP4BP1P59074 171 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 MCATQ8IVS2 390 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 ANKRD44Q8N8A2 993 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 DCPSQ96C86 337 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 ANAPC16Q96DE5 110 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 TMEM87BQ96K49 555 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 EYA3Q99504 573 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 SSBP4Q9BWG4 385 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 GMIPQ9P107 970 aa9.87□□□□□ -0.83
TRAPPC12-221ENST00000489032 XDHP47989 1333 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 SRGAP3O43295 1099 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 RAD17O75943 681 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 STK10O94804 968 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 TBC1D8O95759 1140 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 GTF2F1P35269 517 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 GPSM2P81274 684 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 OR6P1Q8NGX9 317 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 ACSF2Q96CM8 615 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 FAM83CQ9BQN1 747 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 FOXQ1Q9C009 403 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 FBRSQ9HAH7 460 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 TJP2Q9UDY2 1190 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 MINPP1Q9UNW1 487 aa9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 R3HCC1Q9Y3T6 440 aaKnown RBP9.86□□□□□ -0.83
TRAPPC12-221ENST00000489032 TAF1P21675 1872 aa9.85□□□□□ -0.83
TRAPPC12-221ENST00000489032 UFL1O94874 794 aa9.85□□□□□ -0.83
TRAPPC12-221ENST00000489032 LRIG2O94898 1065 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms