RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 NSMFQ6X4W1 530 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 TTLL10Q6ZVT0 673 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 MIB1Q86YT6 1006 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 FAM26EQ8N5C1 309 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 ZNF526Q8TF50 670 aaPredicted RBP3.95□□□□□ -1.78
CALD1-221ENST00000489019 ZNF669Q96BR6 464 aaPredicted RBP3.95□□□□□ -1.78
CALD1-221ENST00000489019 ARMC5Q96C12 935 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 DDX11Q96FC9 970 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 C20orf173Q96LM9 149 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 SIN3AQ96ST3 1273 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 JAM3Q9BX67 310 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 AP5M1Q9H0R1 490 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 GPR27Q9NS67 375 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 RRP7BPQ9NSQ0 103 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 SIRPGQ9P1W8 387 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 MAGI3Q5TCQ9 1506 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 ASXL2Q76L83 1435 aa3.95□□□□□ -1.78
CALD1-221ENST00000489019 CEP170Q5SW79 1584 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 TONSLQ96HA7 1378 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 TADA3O75528 432 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 CAP1Q01518 475 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 SSRP1Q08945 709 aaKnown RBP3.94□□□□□ -1.78
CALD1-221ENST00000489019 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 ETV3LQ6ZN32 361 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 SAPCD2Q86UD0 394 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 SYT8Q8NBV8 401 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 ARRDC4Q8NCT1 418 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.94□□□□□ -1.78
CALD1-221ENST00000489019 DCAF4Q8WV16 495 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 HIRIP3Q9BW71 556 aaPredicted RBP3.94□□□□□ -1.78
CALD1-221ENST00000489019 XYLT2Q9H1B5 865 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 PARD6AQ9NPB6 346 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 COA3Q9Y2R0 106 aaPredicted RBP3.94□□□□□ -1.78
CALD1-221ENST00000489019 TRAF6Q9Y4K3 522 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 PMF1-BGLAPU3KQ54 211 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 MAPKBP1O60336 1514 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 DISP1Q96F81 1524 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 MIA2Q96PC5 1412 aa3.94□□□□□ -1.78
CALD1-221ENST00000489019 ARID1BQ8NFD5 2236 aaPredicted RBP3.94□□□□□ -1.78
CALD1-221ENST00000489019 TCOF1Q13428 1488 aaKnown RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 A0A0G2JLL6 359 aaPredicted RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 TCRBV5S2A0A599 114 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 SH3D21A4FU49 640 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 PLEKHD1A6NEE1 506 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 FAM153BP0C7A2 387 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 HOXA5P20719 270 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 RBM10P98175 930 aaKnown RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 IFRD2Q12894 506 aaPredicted RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 SMAD4Q13485 552 aaKnown RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 CR1LQ2VPA4 569 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 EMC4Q5J8M3 183 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 FAM209AQ5JX71 171 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 STEAP3Q658P3 488 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 STYK1Q6J9G0 422 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 RSPO2Q6UXX9 243 aaPredicted RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 CD300LDQ6UXZ3 194 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 LBX2Q6XYB7 198 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 STK32CQ86UX6 486 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 FAM126BQ8IXS8 530 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 NLGN1Q8N2Q7 840 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 LINC00482Q8N8I6 264 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 ZBTB38Q8NAP3 1195 aaPredicted RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 FEZF2Q8TBJ5 459 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 EXOC2Q96KP1 924 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 DEPDC7Q96QD5 511 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 GORASP1Q9BQQ3 440 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 EPB41L1Q9H4G0 881 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 ZCCHC4Q9H5U6 513 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 SPATA6Q9NWH7 488 aaPredicted RBP3.93□□□□□ -1.78
CALD1-221ENST00000489019 SNTG2Q9NY99 539 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 ZNF652Q9Y2D9 606 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 ARHGEF11O15085 1522 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 HFM1A2PYH4 1435 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 UACAQ9BZF9 1416 aa3.93□□□□□ -1.78
CALD1-221ENST00000489019 NUP153P49790 1475 aaKnown RBP3.92□□□□□ -1.78
CALD1-221ENST00000489019 OTOL1A6NHN0 477 aaPredicted RBP3.92□□□□□ -1.78
CALD1-221ENST00000489019 HGSO14964 777 aaPredicted RBP3.92□□□□□ -1.78
CALD1-221ENST00000489019 C6orf222P0C671 652 aaPredicted RBP3.92□□□□□ -1.78
CALD1-221ENST00000489019 CYP2C8P10632 490 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 STAT5AP42229 794 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 SLURP1P55000 103 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 LIPIQ6XZB0 460 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 PIP4K2CQ8TBX8 421 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 PMFBP1Q8TBY8 1022 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 ZBTB8AQ96BR9 441 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 C11orf84Q9BUA3 381 aaPredicted RBP3.92□□□□□ -1.78
CALD1-221ENST00000489019 CFDP1Q9UEE9 299 aaPredicted RBP3.92□□□□□ -1.78
CALD1-221ENST00000489019 RAPGEFL1Q9UHV5 662 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 WASF3Q9UPY6 502 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 NUP160Q12769 1436 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 NAIPQ13075 1403 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 PTPRKQ15262 1439 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 KDM2BQ8NHM5 1336 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 PLB1Q6P1J6 1458 aa3.92□□□□□ -1.78
CALD1-221ENST00000489019 GCC2Q8IWJ2 1684 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 ITSN2Q9NZM3 1697 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 TRBV23-1A0A0A0MS06 115 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 DGKIO75912 1065 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 SOD2P04179 222 aa3.91□□□□□ -1.78
CALD1-221ENST00000489019 GRK2P25098 689 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms