RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SLC10A5Q5PT55 438 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 CERKQ8TCT0 537 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 IFT81Q8WYA0 676 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.47■■□□□ 1.03
HMG20B-213ENST00000488973 RNPC3Q96LT9 517 aaKnown RBP21.47■■□□□ 1.03
HMG20B-213ENST00000488973 TANGO6Q9C0B7 1094 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 PCDHGC5Q9Y5F6 944 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.47■■□□□ 1.03
HMG20B-213ENST00000488973 ESYT2A0FGR8 921 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 HNRNPH1P31943 449 aaKnown RBP21.47■■□□□ 1.03
HMG20B-213ENST00000488973 CALCRLQ16602 461 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 TMEM266Q2M3C6 531 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 MEI1Q5TIA1 1274 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 MICALCLQ6ZW33 695 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 REXO1Q8N1G1 1221 aaKnown RBP21.47■■□□□ 1.03
HMG20B-213ENST00000488973 RAD54LQ92698 747 aa21.47■■□□□ 1.03
HMG20B-213ENST00000488973 COL5A3P25940 1745 aaPredicted RBP21.47■■□□□ 1.03
HMG20B-213ENST00000488973 CDK5RAP2Q96SN8 1893 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 SRRM3A6NNA2 597 aaPredicted RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 MEFVO15553 781 aaPredicted RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 KIAA0754O94854 1291 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 CDC37Q16543 378 aaPredicted RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 YTHDF3Q7Z739 585 aaKnown RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 TBC1D22AQ8WUA7 517 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 RAB34Q9BZG1 259 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 SEC63Q9UGP8 760 aaKnown RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 COL4A3BPQ9Y5P4 624 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 TLR2O60603 784 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 NOL4O94818 638 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 NR1D1P20393 614 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 FKBP3Q00688 224 aaKnown RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 PDIA5Q14554 519 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 FAM83BQ5T0W9 1011 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 GPIHBP1Q8IV16 184 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 PRPF38AQ8NAV1 312 aaKnown RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 CASKIN2Q8WXE0 1202 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 FAM212AQ96EL1 285 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 INPP4AQ96PE3 977 aaPredicted RBP21.46■■□□□ 1.03
HMG20B-213ENST00000488973 NLRC4Q9NPP4 1024 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 ATP6V0A2Q9Y487 856 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 THSD7AQ9UPZ6 1657 aa21.46■■□□□ 1.03
HMG20B-213ENST00000488973 ZSCAN5CA6NGD5 496 aaPredicted RBP21.45■■□□□ 1.02
HMG20B-213ENST00000488973 HMGB1P1B2RPK0 211 aaPredicted RBP21.45■■□□□ 1.02
HMG20B-213ENST00000488973 FSBPO95073 299 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 RASA1P20936 1047 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 SLC18A3Q16572 532 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 OTUD6BQ8N6M0 293 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 EIF1ADQ8N9N8 165 aaKnown RBP21.45■■□□□ 1.02
HMG20B-213ENST00000488973 SH3RF3Q8TEJ3 882 aaPredicted RBP21.45■■□□□ 1.02
HMG20B-213ENST00000488973 ATP6V1G3Q96LB4 118 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 CPVLQ9H3G5 476 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 ESYT3A0FGR9 886 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 NBPF9Q3BBW0 867 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 ZCWPW2Q504Y3 356 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 FBXW10Q5XX13 1052 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 MYOCDQ8IZQ8 938 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 DDX12PQ92771 950 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 KRT12Q99456 494 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 ZNF287Q9HBT7 754 aa21.45■■□□□ 1.02
HMG20B-213ENST00000488973 BIN2Q9UBW5 565 aaPredicted RBP21.45■■□□□ 1.02
HMG20B-213ENST00000488973 CES2O00748 559 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 RGL2O15211 777 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 PPP1R37O75864 691 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 KLRC1P26715 233 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 SSR1P43307 286 aaKnown RBP21.44■■□□□ 1.02
HMG20B-213ENST00000488973 NAA35Q5VZE5 725 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 KCNV1Q6PIU1 500 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 TMC4Q7Z404 712 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 SLC44A5Q8NCS7 719 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 KIF13BQ9NQT8 1826 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 FNTAP49354 379 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 TNNC1P63316 161 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 SEPT2Q15019 361 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 PTGISQ16647 500 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 GGA2Q9UJY4 613 aa21.44■■□□□ 1.02
HMG20B-213ENST00000488973 MYH7BA7E2Y1 1941 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 hCG_1984214I3L0E3 225 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 FTCDO95954 541 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 MYBP10242 640 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 HSPA9P38646 679 aaKnown RBP21.43■■□□□ 1.02
HMG20B-213ENST00000488973 GUCY2FP51841 1108 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 GUCY1A3Q02108 690 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 TMEM119Q4V9L6 283 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 ZNF713Q8N859 430 aaPredicted RBP21.43■■□□□ 1.02
HMG20B-213ENST00000488973 CEP63Q96MT8 703 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 TMEM59LQ9UK28 342 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 CAPN7Q9Y6W3 813 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 CNTNAP4Q9C0A0 1308 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 BAG3O95817 575 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 LDHBP07195 334 aaKnown RBP21.43■■□□□ 1.02
HMG20B-213ENST00000488973 MDH1P40925 334 aaKnown RBP21.43■■□□□ 1.02
HMG20B-213ENST00000488973 PPP4CP60510 307 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 LRRC41Q15345 812 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 CCDC40Q4G0X9 1142 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 KRT79Q5XKE5 535 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 USP38Q8NB14 1042 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 TBC1D5Q92609 795 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 JAG2Q9Y219 1238 aa21.43■■□□□ 1.02
HMG20B-213ENST00000488973 C21orf2O43822 256 aa21.42■■□□□ 1.02
HMG20B-213ENST00000488973 GNA14O95837 355 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms