RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 DSEQ9UL01 958 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 PLAAQ9Y263 795 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 KCTD3Q9Y597 815 aa6.31□□□□□ -1.4
ITGB1-214ENST00000488427 ARHGEF11O15085 1522 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
ITGB1-214ENST00000488427 NUAK1O60285 661 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 TADA3O75528 432 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 RFPL3O75679 317 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 CRTAMO95727 393 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 GJA4P35212 333 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 CAP1Q01518 475 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 GPR19Q15760 415 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 TCERG1LQ5VWI1 586 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 C16orf59Q7L2K0 433 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 UHMK1Q8TAS1 419 aaKnown RBP6.3□□□□□ -1.4
ITGB1-214ENST00000488427 PIP4K2CQ8TBX8 421 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 TOE1Q96GM8 510 aaKnown RBP6.3□□□□□ -1.4
ITGB1-214ENST00000488427 RNPC3Q96LT9 517 aaKnown RBP6.3□□□□□ -1.4
ITGB1-214ENST00000488427 JAM3Q9BX67 310 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 SGPP1Q9BX95 441 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 IPPKQ9H8X2 491 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 SLC52A2Q9HAB3 445 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 GCM1Q9NP62 436 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 INTS7Q9NVH2 962 aaKnown RBP6.3□□□□□ -1.4
ITGB1-214ENST00000488427 PCDHA8Q9Y5H6 950 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 SMARCA2P51531 1590 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 MYO15BQ96JP2 1530 aa6.3□□□□□ -1.4
ITGB1-214ENST00000488427 ASMTLO95671 621 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 ASLP04424 464 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 IGFALSP35858 605 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 EPHB3P54753 998 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 SQSTM1Q13501 440 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 UBE2R2Q712K3 238 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-214ENST00000488427 ASXL2Q76L83 1435 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 BRAPQ7Z569 592 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 IGDCC3Q8IVU1 814 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 FEZ1Q99689 392 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 FANCLQ9NW38 375 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 DTLQ9NZJ0 730 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 MAGEC2Q9UBF1 373 aaPredicted RBP6.29□□□□□ -1.4
ITGB1-214ENST00000488427 ASH2LQ9UBL3 628 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 SIT1Q9Y3P8 196 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 PCDHA9Q9Y5H5 950 aa6.29□□□□□ -1.4
ITGB1-214ENST00000488427 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-214ENST00000488427 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 SMARCA5O60264 1052 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-214ENST00000488427 INHBBP09529 407 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 FBLN1P23142 703 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 IGFBP6P24592 240 aaPredicted RBP6.28□□□□□ -1.4
ITGB1-214ENST00000488427 FOXO4P98177 505 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 FIGNQ5HY92 759 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 TTLL6Q8N841 843 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 PCDH19Q8TAB3 1148 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 CELF4Q9BZC1 486 aaKnown RBP6.28□□□□□ -1.4
ITGB1-214ENST00000488427 KCNK12Q9HB15 430 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 PMF1-BGLAPU3KQ54 211 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 KIF21AQ7Z4S6 1674 aa6.28□□□□□ -1.4
ITGB1-214ENST00000488427 TCRBV5S2A0A599 114 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 CCDC66A2RUB6 948 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 ENPP3O14638 875 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 RAPGEF3O95398 923 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 PI3P19957 117 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 BUD31P41223 144 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-214ENST00000488427 NCKAP1LP55160 1127 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 ARHGAP44Q17R89 818 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 HABP4Q5JVS0 413 aaKnown RBP6.27□□□□□ -1.41
ITGB1-214ENST00000488427 CD300LDQ6UXZ3 194 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 KCTD1Q719H9 257 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-214ENST00000488427 TMEM209Q96SK2 561 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 PDGFDQ9GZP0 370 aaPredicted RBP6.27□□□□□ -1.41
ITGB1-214ENST00000488427 HCFC2Q9Y5Z7 792 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
ITGB1-214ENST00000488427 NESP48681 1621 aa6.27□□□□□ -1.41
ITGB1-214ENST00000488427 TCRBV16S1A1N1A0A5B0 115 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 OPA1O60313 960 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 HIP1RO75146 1068 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 SRGAP2CP0DJJ0 459 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 DNM2P50570 870 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
ITGB1-214ENST00000488427 CTSWP56202 376 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 ARHGAP36Q6ZRI8 547 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 TTLL7Q6ZT98 887 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 FAM129CQ86XR2 697 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 SMARCC2Q8TAQ2 1214 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 SLC7A14Q8TBB6 771 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 CLIC6Q96NY7 704 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 CABP5Q9NP86 173 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 HSPBP1Q9NZL4 362 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
ITGB1-214ENST00000488427 ATP23Q9Y6H3 246 aa6.26□□□□□ -1.41
ITGB1-214ENST00000488427 SLC27A2O14975 620 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 COL6A2P12110 1019 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 EPHA5P54756 1037 aa6.25□□□□□ -1.41
ITGB1-214ENST00000488427 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.411e-8■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms