RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ABCC12Q96J65 1359 aa6.94□□□□□ -1.3
SIK3-212ENST00000488337 A8MUI8 341 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 PTPN2P17706 415 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 TXKP42681 527 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 PFKPQ01813 784 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 AIMP1Q12904 312 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 PDCD4Q53EL6 469 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 C1orf141Q5JVX7 400 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 IL23RQ5VWK5 629 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 CCBE1Q6UXH8 406 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 CACNA2D3Q8IZS8 1091 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ATP6V1G3Q96LB4 118 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 GDAP1L1Q96MZ0 367 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ARHGEF38Q9NXL2 777 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 KIAA1468Q9P260 1216 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 DKK3Q9UBP4 350 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 MAP2P11137 1827 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 MYH2Q9UKX2 1941 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 STAM2O75886 525 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 OAS1P00973 400 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 HNRNPCP07910 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
SIK3-212ENST00000488337 CCNFP41002 786 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ACADSBP45954 432 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 SERPINB8P50452 374 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 MAEAQ7L5Y9 396 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 DZIP1Q86YF9 867 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 GRAMD2AQ8IUY3 354 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 MMGT1Q8N4V1 131 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 SCAIQ8N9R8 606 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ZNF317Q96PQ6 595 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 HMGB1P1B2RPK0 211 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 STK10O94804 968 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 KRT14P02533 472 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 TPBGLP0DKB5 382 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 S100A1P23297 94 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 NLRP12P59046 1061 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 E2F2Q14209 437 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 CCSAPQ6IQ19 270 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 Q6ZNX1 250 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 WDR66Q8TBY9 1149 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ZNF333Q96JL9 665 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 FAM227BQ96M60 508 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 TCHPQ9BT92 498 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 VCXQ9H320 206 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 TAF1DQ9H5J8 278 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 CCDC87Q9NVE4 849 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■□□□□ 8.9
SIK3-212ENST00000488337 DBF4Q9UBU7 674 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 CHMP2BQ9UQN3 213 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 PCDH11XQ9BZA7 1347 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 PRR36Q9H6K5 1346 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ARHGEF10O15013 1369 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 EIF4E1BA6NMX2 242 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 ORC4O43929 436 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 METP08581 1390 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 KRT16P08779 473 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 IL4RP24394 825 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 MATR3P43243 847 aaKnown RBP eCLIP6.93□□□□□ -1.3
SIK3-212ENST00000488337 CRB1P82279 1406 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 NMIQ13287 307 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 CCDC14Q49A88 953 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ZNF569Q5MCW4 686 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 KLC3Q6P597 504 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 BRF1Q92994 677 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ITPKCQ96DU7 683 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 NAA15Q9BXJ9 866 aaKnown RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 RTFDC1Q9BY42 306 aaPredicted RBP6.93□□□□□ -1.3
SIK3-212ENST00000488337 EPB41L1Q9H4G0 881 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 SLAIN2Q9P270 581 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 PDP2Q9P2J9 529 aa6.93□□□□□ -1.3
SIK3-212ENST00000488337 ALKQ9UM73 1620 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 A0A088AWK7 358 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 PLEKHG3A1L390 1219 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 IQCA1LA6NCM1 817 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 BTBD11A6QL63 1104 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 G3V3G9 751 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TNFRSF10AO00220 468 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 PEX11AO75192 247 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 ASMTLO95671 621 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 PYGMP11217 842 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 RPL17P18621 184 aaKnown RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 CALB2P22676 271 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 PDE6CP51160 858 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 SUZ12Q15022 739 aaKnown RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 DCAF8Q5TAQ9 597 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 ZNF365Q70YC5 407 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 ALDH16A1Q8IZ83 802 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 HIC2Q96JB3 615 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 CTAGE1Q96RT6 745 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 TCF12Q99081 682 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 CCT7Q99832 543 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 ALDH8A1Q9H2A2 487 aaPredicted RBP6.92□□□□□ -1.3
SIK3-212ENST00000488337 BABAM1Q9NWV8 329 aa6.92□□□□□ -1.3
SIK3-212ENST00000488337 DDX43Q9NXZ2 648 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms