RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 OLFML2BQ68BL8 750 aa13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 MFSD5Q6N075 450 aa13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 NEK8Q86SG6 692 aa13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 RPAP3Q9H6T3 665 aaPredicted RBP13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 TMEM63CQ9P1W3 806 aa13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 PPP1R9AQ9ULJ8 1098 aa13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 PRRC2BQ5JSZ5 2229 aaKnown RBP13.66□□□□□ -0.22
HLA-DOB-209ENST00000488325 A0A1W2PQ45 241 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 A0A1W2PQY0 241 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 DCDC2CA8MYV0 355 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 LAD1O00515 517 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 FLOT1O75955 427 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 LIG1P18858 919 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 SNAP25P60880 206 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 FAM160A1Q05DH4 1040 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 GSE1Q14687 1217 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 ZNF174Q15697 407 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 USH1GQ495M9 461 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 ZNF365Q70YC5 407 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 DPP9Q86TI2 863 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 FBXL18Q96ME1 805 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 TOX2Q96NM4 488 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 UIMC1Q96RL1 719 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 TBX21Q9UL17 535 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 COG5Q9UP83 839 aa13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
HLA-DOB-209ENST00000488325 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 ICAM1P05362 532 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 ACRP10323 421 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 CSF2RAP15509 400 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 MCM7P33993 719 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 ZNF445P59923 1031 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 PSRC1Q6PGN9 363 aaPredicted RBP13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 EHMT1Q9H9B1 1298 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 DACT1Q9NYF0 836 aa13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
HLA-DOB-209ENST00000488325 GBF1Q92538 1859 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 SPDYE3A6NKU9 549 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 ADAMTS3O15072 1205 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 CTAGE5O15320 804 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 GCFC2P16383 781 aaKnown RBP13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 PTGDRQ13258 359 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 UBE2SQ16763 222 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 RESP18Q5W5W9 173 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 SAMD3Q8N6K7 520 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 ANO3Q9BYT9 981 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
HLA-DOB-209ENST00000488325 FAM237AA0A1B0GTK4 181 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 NEMFO60524 1076 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 NR1I2O75469 434 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 PGK1P00558 417 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 ADORA2AP29274 412 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 DSG3P32926 999 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 PRPHP41219 470 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 OAZ1P54368 228 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 COG2Q14746 738 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 PPP2R2DQ66LE6 453 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 RNF180Q86T96 592 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 MTCH2Q9Y6C9 303 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 ZNF236Q9UL36 1845 aa13.62□□□□□ -0.23
HLA-DOB-209ENST00000488325 MEIS2O14770 477 aa13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
HLA-DOB-209ENST00000488325 RARBP10826 455 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms