RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 GPRASP2Q96D09 838 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 ALDH8A1Q9H2A2 487 aaPredicted RBP11.66□□□□□ -0.54
NEK4-204ENST00000487068 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 NOD1Q9Y239 953 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 CUL9Q8IWT3 2517 aa11.66□□□□□ -0.54
NEK4-204ENST00000487068 EVPLQ92817 2033 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 ST18O60284 1047 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 RAG1P15918 1043 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 FOSBP53539 338 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 ME3Q16798 604 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 MCTP2Q6DN12 878 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 FAM109BQ6ICB4 259 aaPredicted RBP11.65□□□□□ -0.54
NEK4-204ENST00000487068 CYFIP1Q7L576 1253 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 PPP1R13LQ8WUF5 828 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 WASF1Q92558 559 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 AIFM3Q96NN9 605 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 ALG1Q9BT22 464 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 SH3GLB2Q9NR46 395 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 ORC3Q9UBD5 711 aaPredicted RBP11.65□□□□□ -0.54
NEK4-204ENST00000487068 TCEAL9Q9UHQ7 104 aa11.65□□□□□ -0.54
NEK4-204ENST00000487068 ITGB5P18084 799 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 SREBF1P36956 1147 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 RBM25P49756 843 aaKnown RBP11.64□□□□□ -0.55
NEK4-204ENST00000487068 CLK2P49760 499 aaKnown RBP11.64□□□□□ -0.55
NEK4-204ENST00000487068 SP2Q02086 613 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 TRIM29Q14134 588 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 RABEP1Q15276 862 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 METTL7BQ6UX53 244 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 ANKRD33Q7Z3H0 272 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 GIMAP8Q8ND71 665 aaPredicted RBP11.64□□□□□ -0.55
NEK4-204ENST00000487068 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
NEK4-204ENST00000487068 GUCD1Q96NT3 240 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 SDF4Q9BRK5 362 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 LIMCH1Q9UPQ0 1083 aa11.64□□□□□ -0.55
NEK4-204ENST00000487068 UNC80Q8N2C7 3258 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 DDX39AO00148 427 aaKnown RBP11.63□□□□□ -0.55
NEK4-204ENST00000487068 B4GALT4O60513 344 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 ICAM3P32942 547 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 FAAP100Q0VG06 881 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 MFSD10Q14728 455 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
NEK4-204ENST00000487068 ZNF697Q5TEC3 545 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 BLIDQ8IZY5 108 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 C7orf31Q8N865 590 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 BADQ92934 168 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 FAM161BQ96MY7 647 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 TOX2Q96NM4 488 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 MXRA8Q9BRK3 442 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 SEZ6LQ9BYH1 1024 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 BRMS1Q9HCU9 246 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 JADE2Q9NQC1 790 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 ZNF215Q9UL58 517 aaPredicted RBP11.63□□□□□ -0.55
NEK4-204ENST00000487068 PCDHA4Q9UN74 947 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 KCNJ14Q9UNX9 436 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 UBIAD1Q9Y5Z9 338 aa11.63□□□□□ -0.55
NEK4-204ENST00000487068 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 LGALS2P05162 132 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 PSEN2P49810 448 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
NEK4-204ENST00000487068 KIAA0753Q2KHM9 967 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 PLA2G4DQ86XP0 818 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 TRIM43Q96BQ3 446 aaPredicted RBP11.62□□□□□ -0.55
NEK4-204ENST00000487068 ZSCAN31Q96LW9 406 aaPredicted RBP11.62□□□□□ -0.55
NEK4-204ENST00000487068 UIMC1Q96RL1 719 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 TRPV6Q9H1D0 765 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 HIPK3Q9H422 1215 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 JPH1Q9HDC5 661 aaPredicted RBP11.62□□□□□ -0.55
NEK4-204ENST00000487068 TRMT13Q9NUP7 481 aaKnown RBP11.62□□□□□ -0.55
NEK4-204ENST00000487068 SIP14410 1827 aa11.62□□□□□ -0.55
NEK4-204ENST00000487068 ARID2Q68CP9 1835 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 ADAMTS3O15072 1205 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 JAK2O60674 1132 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 CTDNEP1O95476 244 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 F2P00734 622 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 KCNA2P16389 499 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 TCF7P36402 384 aaPredicted RBP11.61□□□□□ -0.55
NEK4-204ENST00000487068 CDK7P50613 346 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 FPGSQ05932 587 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
NEK4-204ENST00000487068 PRR16Q569H4 304 aa11.61□□□□□ -0.55
NEK4-204ENST00000487068 GALNT17Q6IS24 598 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms