RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 POLR3CQ9BUI4 534 aaPredicted RBP22.63■■□□□ 1.21
HPS3-206ENST00000486530 NOC4LQ9BVI4 516 aaKnown RBP22.63■■□□□ 1.21
HPS3-206ENST00000486530 DNM3Q9UQ16 869 aa22.63■■□□□ 1.21
HPS3-206ENST00000486530 FRMD3A2A2Y4 597 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 INPP5BP32019 993 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 SYCP1Q15431 976 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 SAMD1Q6SPF0 538 aaPredicted RBP22.62■■□□□ 1.21
HPS3-206ENST00000486530 RAD9BQ6WBX8 426 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 APOBEC3FQ8IUX4 373 aaKnown RBP22.62■■□□□ 1.21
HPS3-206ENST00000486530 PRPF38AQ8NAV1 312 aaKnown RBP22.62■■□□□ 1.21
HPS3-206ENST00000486530 WDR18Q9BV38 432 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 CCPG1Q9ULG6 757 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 RABGAP1Q9Y3P9 1069 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 KRT18P05783 430 aaKnown RBP22.62■■□□□ 1.21
HPS3-206ENST00000486530 KRT9P35527 623 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 MTF1Q14872 753 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 MIIPQ5JXC2 388 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 CYP26C1Q6V0L0 522 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 RETREG2Q8NC44 543 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 DESI2Q9BSY9 194 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 NUP58Q9BVL2 599 aa22.62■■□□□ 1.21
HPS3-206ENST00000486530 KIF20AO95235 890 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 SETQ01105 290 aaPredicted RBP22.61■■□□□ 1.21
HPS3-206ENST00000486530 TBC1D8BQ0IIM8 1120 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 SYT2Q8N9I0 419 aaPredicted RBP22.61■■□□□ 1.21
HPS3-206ENST00000486530 SLC5A5Q92911 643 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 EEF2KMTQ96G04 330 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 L2HGDHQ9H9P8 463 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 CAPN11Q9UMQ6 739 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 PCDHA2Q9Y5H9 948 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 ADGRG1Q9Y653 693 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 ZNF536O15090 1300 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 LOXHD1Q8IVV2 1947 aa22.61■■□□□ 1.21
HPS3-206ENST00000486530 PARP14Q460N5 1801 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 DDNO94850 711 aaPredicted RBP22.6■■□□□ 1.21
HPS3-206ENST00000486530 HSD17B4P51659 736 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 LRRC41Q15345 812 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 FKBP15Q5T1M5 1219 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 DCAF15Q66K64 600 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 LRRC55Q6ZSA7 311 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 TSC1Q92574 1164 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 DNAI1Q9UI46 699 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 ZNF112Q9UJU3 913 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 TTC26A0AVF1 554 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 RNF225M0QZC1 329 aaPredicted RBP22.6■■□□□ 1.21
HPS3-206ENST00000486530 PPP2R5CQ13362 524 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 ZCWPW2Q504Y3 356 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 CEP55Q53EZ4 464 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 ARSHQ5FYA8 562 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 HERC4Q5GLZ8 1057 aaPredicted RBP22.6■■□□□ 1.21
HPS3-206ENST00000486530 LRCH2Q5VUJ6 765 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 PRAMEF18Q5VWM3 479 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 GLIS3Q8NEA6 775 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 IQCDQ96DY2 449 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 ERGIC2Q96RQ1 377 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 EIF2AK1Q9BQI3 630 aaKnown RBP22.6■■□□□ 1.21
HPS3-206ENST00000486530 RNF181Q9P0P0 153 aa22.6■■□□□ 1.21
HPS3-206ENST00000486530 LUC7L2Q9Y383 392 aaKnown RBP22.6■■□□□ 1.21
HPS3-206ENST00000486530 PSMD10O75832 226 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 RBM10P98175 930 aaKnown RBP22.59■■□□□ 1.21
HPS3-206ENST00000486530 MAN2A1Q16706 1144 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 OR8K1Q8NGG5 319 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 HOOK2Q96ED9 719 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 AGBL1Q96MI9 1066 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 DNAJC7Q99615 494 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 TUFT1Q9NNX1 390 aa22.59■■□□□ 1.21
HPS3-206ENST00000486530 NPHP3-ACAD11A0A0J9YXS1 232 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 PSMC6P62333 389 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 ERVK-24P63145 666 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 PABPC4Q13310 644 aaKnown RBP eCLIP22.58■■□□□ 1.21
HPS3-206ENST00000486530 FIGNQ5HY92 759 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 OTOP1Q7RTM1 612 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 MTERF4Q7Z6M4 381 aaKnown RBP22.58■■□□□ 1.21
HPS3-206ENST00000486530 MCF2L2Q86YR7 1114 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 TTYH3Q9C0H2 523 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 GGA3Q9NZ52 723 aa22.58■■□□□ 1.21
HPS3-206ENST00000486530 EML1O00423 815 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 MEIS1O00470 390 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 EYA4O95677 639 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 USP14P54578 494 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 FKBP3Q00688 224 aaKnown RBP22.58■■□□□ 1.2
HPS3-206ENST00000486530 GHRHRQ02643 423 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 VWA3BQ502W6 1294 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 MRPL44Q9H9J2 332 aaKnown RBP22.58■■□□□ 1.2
HPS3-206ENST00000486530 PNMA2Q9UL42 364 aa22.58■■□□□ 1.2
HPS3-206ENST00000486530 GAS7O60861 476 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 SLU7O95391 586 aaKnown RBP22.57■■□□□ 1.2
HPS3-206ENST00000486530 TRIM21P19474 475 aaKnown RBP22.57■■□□□ 1.2
HPS3-206ENST00000486530 MUTP22033 750 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 UBXN2AP68543 259 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 CACNB1Q02641 598 aaPredicted RBP22.57■■□□□ 1.2
HPS3-206ENST00000486530 CYP4A11Q02928 519 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 GIT2Q14161 759 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 TSR1Q2NL82 804 aaKnown RBP22.57■■□□□ 1.2
HPS3-206ENST00000486530 KRT26Q7Z3Y9 468 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 CEP63Q96MT8 703 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 MAP7D2Q96T17 732 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 WDR11Q9BZH6 1224 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 TANGO6Q9C0B7 1094 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 SLC38A10Q9HBR0 1119 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms