RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 RASA3Q14644 834 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
LINC00477-201ENST00000483544 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 PROM2Q8N271 834 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 ACRBPQ8NEB7 543 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 GJD4Q96KN9 370 aaPredicted RBP13.76□□□□□ -0.21
LINC00477-201ENST00000483544 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
LINC00477-201ENST00000483544 CCDC17Q96LX7 622 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 PIGSQ96S52 555 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 IQCGQ9H095 443 aaKnown RBP13.76□□□□□ -0.21
LINC00477-201ENST00000483544 LRWD1Q9UFC0 647 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 DAGLAQ9Y4D2 1042 aa13.76□□□□□ -0.21
LINC00477-201ENST00000483544 KDM3AQ9Y4C1 1321 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 H3BQF6 201 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 FSBPO95073 299 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 RTN3O95197 1032 aaPredicted RBP13.75□□□□□ -0.21
LINC00477-201ENST00000483544 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
LINC00477-201ENST00000483544 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
LINC00477-201ENST00000483544 AMPD2Q01433 879 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 HHATQ5VTY9 493 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 KRT79Q5XKE5 535 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 SAAL1Q96ER3 474 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 SLF1Q9BQI6 1058 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 NOC4LQ9BVI4 516 aaKnown RBP13.75□□□□□ -0.21
LINC00477-201ENST00000483544 GOPCQ9HD26 462 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 MAPK8IP1Q9UQF2 711 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 STK24Q9Y6E0 443 aa13.75□□□□□ -0.21
LINC00477-201ENST00000483544 GOLGA6CA6NDK9 693 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 GOLGA6BA6NDN3 693 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 USP17L5A8MUK1 530 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 GOLGA6DP0CG33 693 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 TECP42680 631 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 ZNF543Q08ER8 600 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 SF3B2Q13435 895 aaKnown RBP13.74□□□□□ -0.21
LINC00477-201ENST00000483544 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 HYIQ5T013 277 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 PAPD7Q5XG87 772 aaKnown RBP13.74□□□□□ -0.21
LINC00477-201ENST00000483544 ANKRD40Q6AI12 368 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 HHIPL2Q6UWX4 724 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 HDXQ7Z353 690 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
LINC00477-201ENST00000483544 RUBCNQ92622 972 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 TSG101Q99816 390 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 MRIQ9BWK5 157 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 EHD4Q9H223 541 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 GOLGA6AQ9NYA3 693 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 POLLQ9UGP5 575 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00477-201ENST00000483544 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
LINC00477-201ENST00000483544 NRXN2Q9P2S2 1712 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 PDLIM1O00151 329 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 AHCYL1O43865 530 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 HLA-DOAP06340 250 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 GRB10Q13322 594 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 PLCB4Q15147 1175 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 MAN2A1Q16706 1144 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 TLDC1Q6P9B6 456 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 TRAPPC11Q7Z392 1133 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 MFN1Q8IWA4 741 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 RAD54LQ92698 747 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 CUL5Q93034 780 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 MTMR8Q96EF0 704 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 VPS18Q9P253 973 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 SERPINB13Q9UIV8 391 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 ATP6V0A2Q9Y487 856 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 MYH7BA7E2Y1 1941 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 B4DLN1 442 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 ZSCAN9O15535 394 aaPredicted RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 YY1P25490 414 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 INPP5BP32019 993 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 CLNS1AP54105 237 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 SFSWAPQ12872 951 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 STK4Q13043 487 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 WDR93Q6P2C0 686 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 WDR59Q6PJI9 974 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 CHP1Q99653 195 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 QTRT2Q9H974 415 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
LINC00477-201ENST00000483544 BIN2Q9UBW5 565 aaPredicted RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 REXO2Q9Y3B8 237 aaKnown RBP13.73□□□□□ -0.21
LINC00477-201ENST00000483544 TARSL2A2RTX5 802 aaKnown RBP13.72□□□□□ -0.21
LINC00477-201ENST00000483544 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
LINC00477-201ENST00000483544 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
LINC00477-201ENST00000483544 GNA14O95837 355 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 TXKP42681 527 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms