RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 AK8Q96MA6 479 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 PLCD4Q9BRC7 762 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 MAD2L2Q9UI95 211 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 FBXL5Q9UKA1 691 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 CD2APQ9Y5K6 639 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 KCNQ2O43526 872 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 SERPING1P05155 500 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 KCNK18Q7Z418 384 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 CACNA2D3Q8IZS8 1091 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 LRRC45Q96CN5 670 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 EIF4E1BA6NMX2 242 aaKnown RBP13.93□□□□□ -0.18
VPS52-218ENST00000482399 CHMP2AO43633 222 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 ORC4O43929 436 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 STAT3P40763 770 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 MDH1P40925 334 aaKnown RBP13.93□□□□□ -0.18
VPS52-218ENST00000482399 SNAP25P60880 206 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 EPN3Q9H201 632 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 DDX25Q9UHL0 483 aaKnown RBP13.93□□□□□ -0.18
VPS52-218ENST00000482399 TSKSQ9UJT2 592 aa13.93□□□□□ -0.18
VPS52-218ENST00000482399 POTEB3A0JP26 581 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 POTECB2RU33 542 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 SART1O43290 800 aaKnown RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 CTNND1O60716 968 aaKnown RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 GFPT2O94808 682 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 SLC9A1P19634 815 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 FECHP22830 423 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 PLTPP55058 493 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 ALKBH5Q6P6C2 394 aaKnown RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 POTEBQ6S5H4 581 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 KCTD1Q719H9 257 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 MYCBPAPQ8TBZ2 947 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 TACO1Q9BSH4 297 aaKnown RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 CUEDC2Q9H467 287 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 MLXIPLQ9NP71 852 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 CHORDC1Q9UHD1 332 aaPredicted RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 MYL1P05976 194 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 PPP1R2P41236 205 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 BTDP43251 543 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 COASYQ13057 564 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 GRM4Q14833 912 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 TBC1D10BQ4KMP7 808 aaPredicted RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 FAM133BQ5BKY9 247 aaKnown RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 HAUS2Q9NVX0 235 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 UTP11Q9Y3A2 253 aaKnown RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 ATRNO75882 1429 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 TTI1O43156 1089 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 NTSR2O95665 410 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 MAP2K1Q02750 393 aaPredicted RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 GRB10Q13322 594 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 GJB7Q6PEY0 223 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 RUFY4Q6ZNE9 571 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 C7orf25Q9BPX7 421 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 TRIM51Q9BSJ1 452 aa13.92□□□□□ -0.18
VPS52-218ENST00000482399 BSDC1Q9NW68 430 aaPredicted RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 ARMCX3Q9UH62 379 aaPredicted RBP13.92□□□□□ -0.18
VPS52-218ENST00000482399 NWD2Q9ULI1 1742 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L15C9J2P7 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L13C9JLJ4 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L11C9JVI0 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L18D6R9N7 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L22D6RA61 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L17D6RBQ6 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L19D6RCP7 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L20D6RJB6 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 CAMTA2O94983 1202 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 GCNT3O95395 438 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 CCDC172P0C7W6 258 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 PCP11498 1178 aaKnown RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 ITGA4P13612 1032 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 KCNH2Q12809 1159 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 ITPK1Q13572 414 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 PTGISQ16647 500 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USH1GQ495M9 461 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 C12orf60Q5U649 245 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 USP17L6PQ6QN14 398 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 N4BP2L2Q92802 583 aaPredicted RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 PAIP2Q9BPZ3 127 aaKnown RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 TTYH3Q9C0H2 523 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 EMILIN3Q9NT22 766 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 ATP6V0A2Q9Y487 856 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 N4BP2Q86UW6 1770 aaPredicted RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 ARFGEF2Q9Y6D5 1785 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 LAD1O00515 517 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 PPP1R12BO60237 982 aaPredicted RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 LRRN2O75325 713 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 LDHCP07864 332 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 EZRP15311 586 aaKnown RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 CDK8P49336 464 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS52-218ENST00000482399 EXOC3L4Q17RC7 722 aa13.91□□□□□ -0.18
VPS52-218ENST00000482399 GKAP1Q5VSY0 366 aaPredicted RBP13.91□□□□□ -0.18
VPS52-218ENST00000482399 DNAJC17Q9NVM6 304 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms