RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NAA15Q9BXJ9 866 aaKnown RBP16.09■□□□□ 0.17
CHD3-211ENST00000481999 GLT8D2Q9H1C3 349 aa16.09■□□□□ 0.17
CHD3-211ENST00000481999 STK17AQ9UEE5 414 aa16.09■□□□□ 0.17
CHD3-211ENST00000481999 EFCAB8A8MWE9 144 aa16.08■□□□□ 0.17
CHD3-211ENST00000481999 GCOM1H8Y6P7 765 aaPredicted RBP16.08■□□□□ 0.17
CHD3-211ENST00000481999 TADA3O75528 432 aa16.08■□□□□ 0.17
CHD3-211ENST00000481999 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.17
CHD3-211ENST00000481999 GYPCP04921 128 aa16.08■□□□□ 0.17
CHD3-211ENST00000481999 POLR2MP0CAP2 368 aa16.08■□□□□ 0.17
CHD3-211ENST00000481999 KLK7P49862 253 aa16.08■□□□□ 0.17
CHD3-211ENST00000481999 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 PEX10O60683 326 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 MYL1P05976 194 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 ALAS1P13196 640 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 AMPD3Q01432 767 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 P2RX5Q93086 422 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 MAGEF1Q9HAY2 307 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 ARGLU1Q9NWB6 273 aaPredicted RBP16.08■□□□□ 0.16
CHD3-211ENST00000481999 VAV3Q9UKW4 847 aa16.08■□□□□ 0.16
CHD3-211ENST00000481999 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 SOWAHDA6NJG2 315 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
CHD3-211ENST00000481999 CCDC175P0C221 793 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 PLA2G4BP0C869 781 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 ARP10275 920 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 Q4G0T1 1027 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 ARSHQ5FYA8 562 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 UNC13DQ70J99 1090 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 GPIHBP1Q8IV16 184 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 ZNF446Q9NWS9 450 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 LIMA1Q9UHB6 759 aaKnown RBP16.07■□□□□ 0.16
CHD3-211ENST00000481999 FEM1BQ9UK73 627 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 SYNPO2Q9UMS6 1093 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 B4DLN1 442 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 UBXN1Q04323 297 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 COASYQ13057 564 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 CTTNQ14247 550 aaKnown RBP16.07■□□□□ 0.16
CHD3-211ENST00000481999 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
CHD3-211ENST00000481999 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 CARD6Q9BX69 1037 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
CHD3-211ENST00000481999 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
CHD3-211ENST00000481999 CTNND1O60716 968 aaKnown RBP16.06■□□□□ 0.16
CHD3-211ENST00000481999 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
CHD3-211ENST00000481999 HMGCS2P54868 508 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 MAP3K9P80192 1104 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 TRMT1LQ7Z2T5 733 aaKnown RBP16.06■□□□□ 0.16
CHD3-211ENST00000481999 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 WDR24Q96S15 920 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 RIPK3Q9Y572 518 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 RSPH10B2B2RC85 870 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 H7C1D1 291 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 RSPH10BP0C881 870 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 CYP11B2P19099 503 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 CLCN6P51797 869 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 CASP5P51878 434 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 STIM1Q13586 685 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 SLFN12Q8IYM2 578 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 CLEC4DQ8WXI8 215 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 CCDC51Q96ER9 411 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 WRAP73Q9P2S5 460 aaPredicted RBP16.06■□□□□ 0.16
CHD3-211ENST00000481999 ZHX2Q9Y6X8 837 aa16.06■□□□□ 0.16
CHD3-211ENST00000481999 LRRC10BA6NIK2 292 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 CCNE1P24864 410 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 CIITAP33076 1130 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 SPAG1Q07617 926 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 CNNM4Q6P4Q7 775 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 FAM160B2Q86V87 743 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 CNGA4Q8IV77 575 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 PRPF38AQ8NAV1 312 aaKnown RBP16.05■□□□□ 0.16
CHD3-211ENST00000481999 ATG4CQ96DT6 458 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 KIAA1683Q9H0B3 1180 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 ITIH6Q6UXX5 1313 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 SFI1A8K8P3 1242 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 MFAP3LO75121 409 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 ICAM1P05362 532 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 ITGB5P18084 799 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 EHHADHQ08426 723 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
CHD3-211ENST00000481999 CNOT6LQ96LI5 555 aaKnown RBP16.05■□□□□ 0.16
CHD3-211ENST00000481999 MRPL11Q9Y3B7 192 aaKnown RBP16.05■□□□□ 0.16
CHD3-211ENST00000481999 KIF20AO95235 890 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 HYIQ5T013 277 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 EIF2AK1Q9BQI3 630 aaKnown RBP16.04■□□□□ 0.16
CHD3-211ENST00000481999 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 MRFAP1Q9Y605 127 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 SSC5DA1L4H1 1573 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
CHD3-211ENST00000481999 PTPRAP18433 802 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 LRCH2Q5VUJ6 765 aa16.04■□□□□ 0.16
CHD3-211ENST00000481999 OTOP1Q7RTM1 612 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms