RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 DSTYKQ6XUX3 929 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 PDZD3Q86UT5 571 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 DENND1CQ8IV53 801 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 CRACR2BQ8N4Y2 399 aaPredicted RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 ESX1Q8N693 406 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
LSM5-210ENST00000480956 TBC1D31Q96DN5 1066 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 VMP1Q96GC9 406 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 ACSBG1Q96GR2 724 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 TMEM169Q96HH4 297 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 B3GNT5Q9BYG0 378 aa9.36□□□□□ -0.91
LSM5-210ENST00000480956 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 TECP42680 631 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 CLEC16AQ2KHT3 1053 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 ZNF423Q2M1K9 1284 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 GLIPR1L2Q4G1C9 344 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 POMZP3Q6PJE2 187 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 RFX8Q6ZV50 586 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 HDXQ7Z353 690 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 RPAINQ86UA6 219 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 TRIM59Q8IWR1 403 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 KIAA0319LQ8IZA0 1049 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 ZSCAN18Q8TBC5 510 aaPredicted RBP9.35□□□□□ -0.91
LSM5-210ENST00000480956 TRAPPC12Q8WVT3 735 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 JADE3Q92613 823 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 CENPIQ92674 756 aaPredicted RBP9.35□□□□□ -0.91
LSM5-210ENST00000480956 NSUN5Q96P11 429 aaKnown RBP9.35□□□□□ -0.91
LSM5-210ENST00000480956 L1RE1Q9UN81 338 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 KCNH4Q9UQ05 1017 aa9.35□□□□□ -0.91
LSM5-210ENST00000480956 ASXL2Q76L83 1435 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 GOLGA8AA7E2F4 631 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 RHPN2P1A8MT19 583 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 SPATA31C2B4DYI2 1134 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 KPNA5O15131 536 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 ITGA6P23229 1130 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 GPR3P46089 330 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 MMP14P50281 582 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 INPP5AQ14642 412 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 RILPL1Q5EBL4 403 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 FAM209BQ5JX69 171 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 LRFN4Q6PJG9 635 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 CCDC129Q6ZRS4 1044 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 UBE2Q1Q7Z7E8 422 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 MTDHQ86UE4 582 aaKnown RBP9.34□□□□□ -0.91
LSM5-210ENST00000480956 BSNDQ8WZ55 320 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 C1GALT1C1Q96EU7 318 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 TMEM120AQ9BXJ8 343 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 NFKBIL1Q9UBC1 381 aaPredicted RBP9.34□□□□□ -0.91
LSM5-210ENST00000480956 AKT3Q9Y243 479 aa9.34□□□□□ -0.91
LSM5-210ENST00000480956 NCK2O43639 380 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 MGEA5O60502 916 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 KCNJ6P48051 423 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 ATXN1P54253 815 aaKnown RBP9.34□□□□□ -0.92
LSM5-210ENST00000480956 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.92
LSM5-210ENST00000480956 GFRA1P56159 465 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 SF1Q15637 639 aaKnown RBP9.34□□□□□ -0.92
LSM5-210ENST00000480956 NEK10Q6ZWH5 1172 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 ZNF527Q8NB42 609 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 CHST14Q8NCH0 376 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 ADAMTS18Q8TE60 1221 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 XPO4Q9C0E2 1151 aaKnown RBP9.34□□□□□ -0.92
LSM5-210ENST00000480956 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.92
LSM5-210ENST00000480956 B3GALT2O43825 422 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 TMEM127O75204 238 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 TBX18O95935 607 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 HOXD8P13378 290 aaPredicted RBP9.33□□□□□ -0.92
LSM5-210ENST00000480956 IDEP14735 1019 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 RNF144AP50876 292 aaPredicted RBP9.33□□□□□ -0.92
LSM5-210ENST00000480956 CASP5P51878 434 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 ARL4CP56559 192 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 KCNQ4P56696 695 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 PRKG1Q13976 671 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 DNAJC21Q5F1R6 531 aaKnown RBP9.33□□□□□ -0.92
LSM5-210ENST00000480956 STYK1Q6J9G0 422 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 ZC3H7AQ8IWR0 971 aaKnown RBP9.33□□□□□ -0.92
LSM5-210ENST00000480956 WASH6PQ9NQA3 447 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 CCM2LQ9NUG4 571 aaPredicted RBP9.33□□□□□ -0.92
LSM5-210ENST00000480956 NSMCE4AQ9NXX6 385 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 GGA3Q9NZ52 723 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 GIMAP2Q9UG22 337 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 EMC9Q9Y3B6 208 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 PCDHA8Q9Y5H6 950 aa9.33□□□□□ -0.92
LSM5-210ENST00000480956 C19orf81C9J6K1 198 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 UBXN7O94888 489 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 GSTP1P09211 210 aaKnown RBP9.32□□□□□ -0.92
LSM5-210ENST00000480956 STARD3Q14849 445 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 HSF5Q4G112 596 aaPredicted RBP9.32□□□□□ -0.92
LSM5-210ENST00000480956 ENOSF1Q7L5Y1 443 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 TMTC1Q8IUR5 882 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 MEIOBQ8N635 442 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 ARL6IP6Q8N6S5 226 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 C7orf31Q8N865 590 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 APPL2Q8NEU8 664 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 MVB12AQ96EY5 273 aa9.32□□□□□ -0.92
LSM5-210ENST00000480956 MRPL9Q9BYD2 267 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms