RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 ECE2O60344 883 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 UFL1O94874 794 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 CEACAM5P06731 702 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 GLDCP23378 1020 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 GMPSP49915 693 aaPredicted RBP7.74□□□□□ -1.17
VPS50-215ENST00000480943 GCKRQ14397 625 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 TNIP1Q15025 636 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 C12orf40Q86WS4 652 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 TTLL11Q8NHH1 800 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 TBC1D16Q8TBP0 767 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 ELMO3Q96BJ8 720 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 GREM2Q9H772 168 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 GPRC5DQ9NZD1 345 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 THSD7BQ9C0I4 1608 aa7.74□□□□□ -1.17
VPS50-215ENST00000480943 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 PSMD14O00487 310 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 LEFTY1O75610 366 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 NTF4P34130 210 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 CNTROBQ8N137 903 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 LINS1Q8NG48 757 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 ASB11Q8WXH4 323 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 DIRC2Q96SL1 478 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 CDC5LQ99459 802 aaKnown RBP7.73□□□□□ -1.17
VPS50-215ENST00000480943 DUSP23Q9BVJ7 150 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 PODXL2Q9NZ53 605 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 SNX11Q9Y5W9 270 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 XDHP47989 1333 aa7.73□□□□□ -1.17
VPS50-215ENST00000480943 A0A0G2JLL6 359 aaPredicted RBP7.72□□□□□ -1.17
VPS50-215ENST00000480943 SHTN1A0MZ66 631 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 FANCGO15287 622 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 ADRB1P08588 477 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 CASP7P55210 303 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 LINC00310P59036 64 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 ZP2Q05996 745 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 RING1Q06587 406 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 PSMD2Q13200 908 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 BEND3Q5T5X7 828 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 USP50Q70EL3 339 aaPredicted RBP7.72□□□□□ -1.17
VPS50-215ENST00000480943 JMYQ8N9B5 988 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 GAL3ST3Q96A11 431 aa7.72□□□□□ -1.17
VPS50-215ENST00000480943 ADARB2Q9NS39 739 aaKnown RBP7.72□□□□□ -1.17
VPS50-215ENST00000480943 SMG5Q9UPR3 1016 aaKnown RBP7.72□□□□□ -1.17
VPS50-215ENST00000480943 CNTNAP1P78357 1384 aa7.71□□□□□ -1.17
VPS50-215ENST00000480943 PRAMEF27A3QJZ7 478 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 E9PSI1 815 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 IGHMBP2P38935 993 aaKnown RBP7.71□□□□□ -1.18
VPS50-215ENST00000480943 DAB2P98082 770 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 FYB2Q5VWT5 728 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 LRFN4Q6PJG9 635 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 CDC37L1Q7L3B6 337 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 CYFIP1Q7L576 1253 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 HDXQ7Z353 690 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 CXorf38Q8TB03 319 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 PLA2G12BQ9BX93 195 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 EPB41L4BQ9H329 900 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 PRDM7Q9NQW5 492 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 KCNQ5Q9NR82 932 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 CNOT7Q9UIV1 285 aaKnown RBP7.71□□□□□ -1.18
VPS50-215ENST00000480943 MED23Q9ULK4 1368 aa7.71□□□□□ -1.18
VPS50-215ENST00000480943 AKAP11Q9UKA4 1901 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 ANKRD18BA2A2Z9 1011 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 WTIPA6NIX2 430 aaPredicted RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 H7C1D1 291 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 CCER2I3L3R5 266 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 TRAF5O00463 557 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 BMP7P18075 431 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 CCT4P50991 539 aaKnown RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 RPS26P62854 115 aaKnown RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 PTPN11Q06124 597 aaPredicted RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 SLFN5Q08AF3 891 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 IKZF1Q13422 519 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 INPP5AQ14642 412 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 TBC1D10BQ4KMP7 808 aaPredicted RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 MEI1Q5TIA1 1274 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 DPF2Q92785 391 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 PLPPR2Q96GM1 343 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 MPHOSPH8Q99549 860 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 GLIS2Q9BZE0 524 aaPredicted RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 DCP1AQ9NPI6 582 aaPredicted RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 C9orf78Q9NZ63 289 aaPredicted RBP7.7□□□□□ -1.18
VPS50-215ENST00000480943 MINPP1Q9UNW1 487 aa7.7□□□□□ -1.18
VPS50-215ENST00000480943 ZNF609O15014 1411 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 GRM8O00222 908 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 SUV39H1O43463 412 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 ALDH1L1O75891 902 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 CSF1RP07333 972 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 HSPA1AP0DMV8 641 aaKnown RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 HSPA1BP0DMV9 641 aaKnown RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 RPS12P25398 132 aaKnown RBP7.69□□□□□ -1.18
VPS50-215ENST00000480943 LIG3P49916 1009 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 FOXO4P98177 505 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 MAP3K11Q16584 847 aa7.69□□□□□ -1.18
VPS50-215ENST00000480943 EPHA10Q5JZY3 1008 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms