RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 SLITRK6Q9H5Y7 841 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
SIK3-210ENST00000480468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.67□□□□□ -0.54
SIK3-210ENST00000480468 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
SIK3-210ENST00000480468 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 PPFIA2O75334 1257 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 FTCDO95954 541 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 MMEP08473 750 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 UQCRFS1P1P0C7P4 283 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 RARAP10276 462 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 PHKG2P15735 406 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 ATP2A2P16615 1042 aaKnown RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 ATP4AP20648 1035 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 ABL2P42684 1182 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 IFT74Q96LB3 600 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 TXLNGYQ9BZA5 131 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 FAM114A2Q9NRY5 505 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 AGAP1Q9UPQ3 857 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 PRDM1O75626 825 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 MBD4O95243 580 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 NPTXRO95502 500 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 SERPING1P05155 500 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 NUDT17P0C025 328 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 CALM1P0DP23 149 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 CALM2P0DP24 149 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 CALM3P0DP25 149 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 MCM7P33993 719 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 EHHADHQ08426 723 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 CROCCP2Q86T23 111 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 DNAJC5Q9H3Z4 198 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 ARHGEF3Q9NR81 526 aa11.66□□□□□ -0.54
SIK3-210ENST00000480468 PAPOLBQ9NRJ5 636 aaKnown RBP11.66□□□□□ -0.54
SIK3-210ENST00000480468 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 E7ENQ6 273 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 OAS1P00973 400 aaKnown RBP11.65□□□□□ -0.54
SIK3-210ENST00000480468 VIMP08670 466 aaKnown RBP11.65□□□□□ -0.54
SIK3-210ENST00000480468 CHN1P15882 459 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
SIK3-210ENST00000480468 KIF5BP33176 963 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 USP11P51784 963 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 KCNJ2P63252 427 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 RPS6KA1Q15418 735 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 CENPPQ6IPU0 288 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 PIK3AP1Q6ZUJ8 805 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 MDM1Q8TC05 714 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 NAF1Q96HR8 494 aaKnown RBP11.65□□□□□ -0.54
SIK3-210ENST00000480468 TSC22D3Q99576 134 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 C7orf25Q9BPX7 421 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 PLCD4Q9BRC7 762 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 OSBPL1AQ9BXW6 950 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 RAB17Q9H0T7 212 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 MMRN2Q9H8L6 949 aa11.65□□□□□ -0.54
SIK3-210ENST00000480468 DOCK2Q92608 1830 aa11.65□□□□□ -0.55
SIK3-210ENST00000480468 TNKSO95271 1327 aa11.65□□□□□ -0.55
SIK3-210ENST00000480468 PGRMC1O00264 195 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 CSF1RP07333 972 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 KLRC1P26715 233 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 MRPS35P82673 323 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 LACTBP83111 547 aaPredicted RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 DHX9Q08211 1270 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 BNIP1Q12981 228 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 FAM133BQ5BKY9 247 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 FOXR2Q6PJQ5 311 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 TMTC3Q6ZXV5 915 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 GALNT15Q8N3T1 639 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ANKS1AQ92625 1134 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ADAM7Q9H2U9 754 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 CEP72Q9P209 647 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 SH3BP1Q9Y3L3 701 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 LRRC42Q9Y546 428 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 IGF2BP3O00425 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
SIK3-210ENST00000480468 UBOX5O94941 541 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 KIF4AO95239 1232 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 TATP17735 454 aaPredicted RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 CNGA1P29973 690 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 PDE6CP51160 858 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 COPS2P61201 443 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ATP11AP98196 1134 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 PDE4DQ08499 809 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 SLC18A3Q16572 532 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ZC3H12AQ5D1E8 599 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 MTHFD1LQ6UB35 978 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 DTHD1Q6ZMT9 781 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms