RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
SP140-210ENST00000479539 ATP9AO75110 1047 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 ZNF286BP0CG31 522 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 CYP2C9P11712 490 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 CSF2RAP15509 400 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 KCNA2P16389 499 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 GNA11P29992 359 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 SREBF1P36956 1147 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 MFSD10Q14728 455 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 GPR20Q99678 358 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 MXRA8Q9BRK3 442 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 ANO3Q9BYT9 981 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 C6orf50Q9HD87 102 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 TMEM260Q9NX78 707 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 UMODL1Q5DID0 1318 aa12.05□□□□□ -0.48
SP140-210ENST00000479539 MEIS1O00470 390 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 CPLX1O14810 134 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 ADAMTS3O15072 1205 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 PPFIA3O75145 1194 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 CCL23P55773 120 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 CHMP4BP1P59074 171 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 SSRP1Q08945 709 aaKnown RBP12.04□□□□□ -0.48
SP140-210ENST00000479539 MTMR1Q13613 665 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 PTGISQ16647 500 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 CEP55Q53EZ4 464 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 JAKMIP3Q5VZ66 844 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 GDF6Q6KF10 455 aaPredicted RBP12.04□□□□□ -0.48
SP140-210ENST00000479539 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
SP140-210ENST00000479539 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 C7orf31Q8N865 590 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 CYP2W1Q8TAV3 490 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 CRYGNQ8WXF5 182 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.04□□□□□ -0.48
SP140-210ENST00000479539 WNT8AQ9H1J5 351 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 IL23AQ9NPF7 189 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 SH3GLB2Q9NR46 395 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 KCNH7Q9NS40 1196 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 HDAC6Q9UBN7 1215 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 GTF2IRD1Q9UHL9 959 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 TPCN1Q9ULQ1 816 aa12.04□□□□□ -0.48
SP140-210ENST00000479539 H3BRB1 525 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 NOP56O00567 594 aaKnown RBP12.03□□□□□ -0.48
SP140-210ENST00000479539 PFKFB2O60825 505 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 DEXIO95424 95 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 LGALS2P05162 132 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 CYP3A4P08684 503 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 AK2P54819 239 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 SCRN1Q12765 414 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 STK3Q13188 491 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 RASIP1Q5U651 963 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 NIPA1Q7RTP0 329 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
SP140-210ENST00000479539 CCDC148Q8NFR7 591 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 VWCEQ96DN2 955 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 ALG1Q9BT22 464 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
SP140-210ENST00000479539 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
SP140-210ENST00000479539 VPS54Q9P1Q0 977 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 TELO2Q9Y4R8 837 aa12.03□□□□□ -0.48
SP140-210ENST00000479539 ARP10275 920 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 ACRP10323 421 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 HOXC8P31273 242 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
SP140-210ENST00000479539 RBL2Q08999 1139 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 BFSP2Q13515 415 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 HIC1Q14526 733 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 C8orf34Q49A92 452 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.49
SP140-210ENST00000479539 ZNF365Q70YC5 407 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
SP140-210ENST00000479539 REXO1Q8N1G1 1221 aaKnown RBP12.02□□□□□ -0.49
SP140-210ENST00000479539 RETREG2Q8NC44 543 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 CAGE1Q8TC20 777 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 SEPT1Q8WYJ6 367 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 SCLYQ96I15 445 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
SP140-210ENST00000479539 NFASCO94856 1347 aa12.02□□□□□ -0.49
SP140-210ENST00000479539 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 GSTTP1A0A1W2PQM5 241 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 CDKL5O76039 1030 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 FGBP02675 491 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 PFKMP08237 780 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 IQCF3P0C7M6 154 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 CIITAP33076 1130 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 RFC2P35250 354 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 ZNF76P36508 570 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 NLRP5P59047 1200 aa12.01□□□□□ -0.49
SP140-210ENST00000479539 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
SP140-210ENST00000479539 SP4Q02446 784 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms