RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 GH2P01242 217 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 CA3P07451 260 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 VCAM1P19320 739 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 ERCC3P19447 782 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 PDE12Q6L8Q7 609 aaKnown RBP7.52□□□□□ -1.21
LINC00173-202ENST00000477702 XKR5Q6UX68 686 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 ATG9AQ7Z3C6 839 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.21
LINC00173-202ENST00000477702 ZGPATQ8N5A5 531 aaKnown RBP7.52□□□□□ -1.21
LINC00173-202ENST00000477702 SH3RF3Q8TEJ3 882 aaPredicted RBP7.52□□□□□ -1.21
LINC00173-202ENST00000477702 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 ARNTL2Q8WYA1 636 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 MAML3Q96JK9 1138 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 CITED4Q96RK1 184 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 SIL1Q9H173 461 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 MTIF3Q9H2K0 278 aaKnown RBP7.52□□□□□ -1.21
LINC00173-202ENST00000477702 CHRDQ9H2X0 955 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 PI4KBQ9UBF8 816 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 PCDHA11Q9Y5I1 949 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 SLC4A7Q9Y6M7 1214 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 CACNA1BQ00975 2339 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 UMODL1Q5DID0 1318 aa7.52□□□□□ -1.21
LINC00173-202ENST00000477702 MYADML2A6NDP7 307 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 ZBTB42B2RXF5 422 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 STRNO43815 780 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 ADAMTS4O75173 837 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 VAMP4O75379 141 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 ALADP13716 330 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 ATP2A2P16615 1042 aaKnown RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 POU3F3P20264 500 aaPredicted RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 MAP2K3P46734 347 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 CCL23P55773 120 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 SRSF11Q05519 484 aaKnown RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 DSC3Q14574 896 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 PLS1Q14651 629 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 KCNA10Q16322 511 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 SPTY2D1Q68D10 685 aaPredicted RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 NCAPG2Q86XI2 1143 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 MAPKAPK5Q8IW41 473 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 ACER1Q8TDN7 264 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 NUP133Q8WUM0 1156 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 RPAP3Q9H6T3 665 aaPredicted RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 SLC5A4Q9NY91 659 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 ABI2Q9NYB9 513 aaPredicted RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 KANSL3Q9P2N6 904 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 SAP30BPQ9UHR5 308 aaKnown RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 PALD1Q9ULE6 856 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 RIF1Q5UIP0 2472 aaKnown RBP7.51□□□□□ -1.21
LINC00173-202ENST00000477702 SYNRGQ9UMZ2 1314 aa7.51□□□□□ -1.21
LINC00173-202ENST00000477702 TREHO43280 583 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 ARHGEF15O94989 841 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
LINC00173-202ENST00000477702 POLR3DP05423 398 aaPredicted RBP7.5□□□□□ -1.21
LINC00173-202ENST00000477702 PGK2P07205 417 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 ARAFP10398 606 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 RFX5P48382 616 aaPredicted RBP7.5□□□□□ -1.21
LINC00173-202ENST00000477702 CDK7P50613 346 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 EHHADHQ08426 723 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 GRB10Q13322 594 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 LBX2Q6XYB7 198 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 HFE2Q6ZVN8 426 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 DHX32Q7L7V1 743 aaKnown RBP7.5□□□□□ -1.21
LINC00173-202ENST00000477702 SPRED2Q7Z698 418 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 NPAS4Q8IUM7 802 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 FAM178BQ8IXR5 827 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 C12orf42Q96LP6 360 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 OXCT2Q9BYC2 517 aaPredicted RBP7.5□□□□□ -1.21
LINC00173-202ENST00000477702 SPATC1LQ9H0A9 340 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 KCNH6Q9H252 994 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
LINC00173-202ENST00000477702 CACNA1HO95180 2353 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 SIPA1L1O43166 1804 aa7.5□□□□□ -1.21
LINC00173-202ENST00000477702 ARVCFO00192 962 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 EREGO14944 169 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 DCXO43602 365 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 MAP3K6O95382 1288 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 LDHCP07864 332 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 ZNF865P0CJ78 1059 aaPredicted RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 AKR1A1P14550 325 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 IL9P15248 144 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 KCNA5P22460 613 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 ADH6P28332 368 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 GSTO1P78417 241 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 EXOSC9Q06265 439 aaKnown RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 RAB3GAP1Q15042 981 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 TTC39BQ5VTQ0 682 aaPredicted RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 CCSAPQ6IQ19 270 aaPredicted RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 PI16Q6UXB8 463 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 FOXP4Q8IVH2 680 aaPredicted RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 FAM126BQ8IXS8 530 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 KLHDC9Q8NEP7 349 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 PRSS33Q8NF86 280 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 TGFBRAP1Q8WUH2 860 aa7.49□□□□□ -1.21
LINC00173-202ENST00000477702 NSUN4Q96CB9 384 aaKnown RBP7.49□□□□□ -1.21
LINC00173-202ENST00000477702 DMRTB1Q96MA1 342 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms