RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 LRRC53A6NM62 1247 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 ENTPD3O75355 529 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 RHOXF2BP0C7M4 288 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 CASP5P51878 434 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 SLC12A3P55017 1021 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 KRT83P78385 493 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 PABPC4Q13310 644 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 EZH2Q15910 746 aaKnown RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 NOA1Q8NC60 698 aaKnown RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 SCFD1Q8WVM8 642 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 NAP1L4Q99733 375 aaKnown RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 RHOXF2Q9BQY4 288 aa15.62■□□□□ 0.09
UBXN11-214ENST00000475591 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
UBXN11-214ENST00000475591 KRT18P05783 430 aaKnown RBP15.61■□□□□ 0.09
UBXN11-214ENST00000475591 CYP4A11Q02928 519 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 KCNMA1Q12791 1236 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 RRAGAQ7L523 313 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 CCDC65Q8IXS2 484 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 ZFP91Q96JP5 570 aaPredicted RBP15.61■□□□□ 0.09
UBXN11-214ENST00000475591 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 PSMD14O00487 310 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 MSH4O15457 936 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 SREBF1P36956 1147 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 ZYXQ15942 572 aaKnown RBP15.61■□□□□ 0.09
UBXN11-214ENST00000475591 CCDC40Q4G0X9 1142 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 SLFN12Q8IYM2 578 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 CCDC170Q8IYT3 715 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 CCDC42Q96M95 316 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 PLAGL2Q9UPG8 496 aa15.61■□□□□ 0.09
UBXN11-214ENST00000475591 FGFR1OPO95684 399 aaKnown RBP15.6■□□□□ 0.09
UBXN11-214ENST00000475591 EIF4A3P38919 411 aaKnown RBP15.6■□□□□ 0.09
UBXN11-214ENST00000475591 FKBP3Q00688 224 aaKnown RBP15.6■□□□□ 0.09
UBXN11-214ENST00000475591 TRAPPC11Q7Z392 1133 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 BAP1Q92560 729 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 KRT86O43790 486 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 UBXN2AP68543 259 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 EN1Q05925 392 aaPredicted RBP15.6■□□□□ 0.09
UBXN11-214ENST00000475591 SLC15A2Q16348 729 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 WHAMMP3Q1A5X7 153 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 Q4G0T1 1027 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 FAM83BQ5T0W9 1011 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 ZNF772Q68DY9 489 aaPredicted RBP15.6■□□□□ 0.09
UBXN11-214ENST00000475591 CCDC174Q6PII3 467 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 CAPZA3Q96KX2 299 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 CRACR2AQ9BSW2 395 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 KCTD10Q9H3F6 313 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 NLRC4Q9NPP4 1024 aa15.6■□□□□ 0.09
UBXN11-214ENST00000475591 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
UBXN11-214ENST00000475591 CTAGE15A4D2H0 777 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 IPO7O95373 1038 aaKnown RBP15.59■□□□□ 0.09
UBXN11-214ENST00000475591 CTAGE8P0CG41 777 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 MOXD1Q6UVY6 613 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 CTAGE6Q86UF2 777 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 CCDC84Q86UT8 332 aaPredicted RBP15.59■□□□□ 0.09
UBXN11-214ENST00000475591 CTAGE4Q8IX94 777 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 ARFGAP3Q9NP61 516 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 SCAF8Q9UPN6 1271 aaKnown RBP15.59■□□□□ 0.09
UBXN11-214ENST00000475591 ABCB11O95342 1321 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 EML1O00423 815 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 HNRNPH3P31942 346 aaKnown RBP15.59■□□□□ 0.09
UBXN11-214ENST00000475591 MMP14P50281 582 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 KIF11P52732 1056 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 HAUS3Q68CZ6 603 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 BTNL9Q6UXG8 535 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 REEP2Q9BRK0 252 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 MLXIPQ9HAP2 919 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 ZNF277Q9NRM2 450 aaPredicted RBP15.59■□□□□ 0.09
UBXN11-214ENST00000475591 RGL1Q9NZL6 768 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 VAV3Q9UKW4 847 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 COL4A5P29400 1685 aa15.59■□□□□ 0.09
UBXN11-214ENST00000475591 TNS1Q9HBL0 1735 aaKnown RBP15.59■□□□□ 0.09
UBXN11-214ENST00000475591 ZNF185O15231 689 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 CFBP00751 764 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 STAT2P52630 851 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 VAV2P52735 878 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 CDK17Q00537 523 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 TUBB2AQ13885 445 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 GIT2Q14161 759 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 MIGA2Q7L4E1 593 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 NEK11Q8NG66 645 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 MMS19Q96T76 1030 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 TUBB2BQ9BVA1 445 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 VEZTQ9HBM0 779 aa15.58■□□□□ 0.09
UBXN11-214ENST00000475591 FRMD3A2A2Y4 597 aa15.58■□□□□ 0.08
UBXN11-214ENST00000475591 NOL4O94818 638 aa15.58■□□□□ 0.08
UBXN11-214ENST00000475591 ZNF76P36508 570 aa15.58■□□□□ 0.08
UBXN11-214ENST00000475591 LONRF2Q1L5Z9 754 aa15.58■□□□□ 0.08
UBXN11-214ENST00000475591 RSBN1LQ6PCB5 846 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms