RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 GLIS2Q9BZE0 524 aaPredicted RBP24.18■■□□□ 1.46
CCM2-206ENST00000474617 SEMA6BQ9H3T3 888 aa24.18■■□□□ 1.46
CCM2-206ENST00000474617 GPRC5DQ9NZD1 345 aa24.18■■□□□ 1.46
CCM2-206ENST00000474617 PPP2R2CQ9Y2T4 447 aa24.18■■□□□ 1.46
CCM2-206ENST00000474617 ZNF536O15090 1300 aa24.18■■□□□ 1.46
CCM2-206ENST00000474617 FRMPD4Q14CM0 1322 aa24.18■■□□□ 1.46
CCM2-206ENST00000474617 DICER1Q9UPY3 1922 aaKnown RBP24.17■■□□□ 1.46
CCM2-206ENST00000474617 E9PMD0 336 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 SPATA31C1P0DKV0 1188 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 GAP43P17677 238 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 INPP5BP32019 993 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 PRELPP51888 382 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 BACE1P56817 501 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 ETF1P62495 437 aaKnown RBP24.17■■□□□ 1.46
CCM2-206ENST00000474617 FKBP3Q00688 224 aaKnown RBP24.17■■□□□ 1.46
CCM2-206ENST00000474617 SUPT20HL1Q3ZLR7 823 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 CYP26C1Q6V0L0 522 aa24.17■■□□□ 1.46
CCM2-206ENST00000474617 MTERF4Q7Z6M4 381 aaKnown RBP24.17■■□□□ 1.46
CCM2-206ENST00000474617 A0A1W2PQJ5 194 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 EGFRP00533 1210 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 SSBP05455 408 aaKnown RBP eCLIP24.16■■□□□ 1.46
CCM2-206ENST00000474617 VCAM1P19320 739 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 CASP14P31944 242 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 NOL9Q5SY16 702 aaKnown RBP24.16■■□□□ 1.46
CCM2-206ENST00000474617 ZNF280CQ8ND82 737 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 HSD17B14Q9BPX1 270 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 EIF2AK1Q9BQI3 630 aaKnown RBP24.16■■□□□ 1.46
CCM2-206ENST00000474617 ABHD10Q9NUJ1 306 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 FBXO28Q9NVF7 368 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 CAPN11Q9UMQ6 739 aa24.16■■□□□ 1.46
CCM2-206ENST00000474617 RBBP6Q7Z6E9 1792 aaKnown RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 GAS7O60861 476 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 STAT3P40763 770 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 MAN2A1Q16706 1144 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 EDRF1Q3B7T1 1238 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 MXRA8Q9BRK3 442 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 NOC4LQ9BVI4 516 aaKnown RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 TEKT3Q9BXF9 490 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 TANGO6Q9C0B7 1094 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 LUC7L2Q9Y383 392 aaKnown RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 LOXHD1Q8IVV2 1947 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 POTEFA5A3E0 1075 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 RIOK3O14730 519 aaKnown RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 CTIFO43310 598 aaKnown RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 FLOT1O75955 427 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 POTEIP0CG38 1075 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 EPHA7Q15375 998 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 ZCWPW2Q504Y3 356 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 HERC4Q5GLZ8 1057 aaPredicted RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 PCNX4Q63HM2 1172 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 POTEGQ6S5H5 508 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 POTEEQ6S8J3 1075 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 ZNF397Q8NF99 534 aaPredicted RBP24.15■■□□□ 1.46
CCM2-206ENST00000474617 OR8K1Q8NGG5 319 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 ZNF577Q9BSK1 485 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 PCDHA2Q9Y5H9 948 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 COL4A3BPQ9Y5P4 624 aa24.15■■□□□ 1.46
CCM2-206ENST00000474617 MYPNQ86TC9 1320 aa24.14■■□□□ 1.46
CCM2-206ENST00000474617 ZNF541Q9H0D2 1346 aa24.14■■□□□ 1.46
CCM2-206ENST00000474617 MARSP56192 900 aaKnown RBP24.14■■□□□ 1.45
CCM2-206ENST00000474617 TBC1D8BQ0IIM8 1120 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 NBPF12Q5TAG4 269 aaPredicted RBP24.14■■□□□ 1.45
CCM2-206ENST00000474617 CREBRFQ8IUR6 639 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 REXO1L1PQ8IX06 675 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 CLEC4DQ8WXI8 215 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 GJA10Q969M2 543 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 NACC1Q96RE7 527 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 DNAJC7Q99615 494 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 EDEM3Q9BZQ6 932 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 SEL1LQ9UBV2 794 aa24.14■■□□□ 1.45
CCM2-206ENST00000474617 MTMR2Q13614 643 aa24.13■■□□□ 1.45
CCM2-206ENST00000474617 TKFCQ3LXA3 575 aa24.13■■□□□ 1.45
CCM2-206ENST00000474617 ZC3H3Q8IXZ2 948 aaKnown RBP24.13■■□□□ 1.45
CCM2-206ENST00000474617 EMILIN3Q9NT22 766 aa24.13■■□□□ 1.45
CCM2-206ENST00000474617 COBLO75128 1261 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 TBCAO75347 108 aaKnown RBP24.12■■□□□ 1.45
CCM2-206ENST00000474617 PTPRAP18433 802 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 KRT9P35527 623 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 FXR1P51114 621 aaKnown RBP eCLIP24.12■■□□□ 1.45
CCM2-206ENST00000474617 PPP2R3AQ06190 1150 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 GIT2Q14161 759 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 VWA3BQ502W6 1294 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 ANGEL2Q5VTE6 544 aaKnown RBP24.12■■□□□ 1.45
CCM2-206ENST00000474617 B3GNT9Q6UX72 402 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 LRRC55Q6ZSA7 311 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 AGBL1Q96MI9 1066 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 MAP7D2Q96T17 732 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 RPAP3Q9H6T3 665 aaPredicted RBP24.12■■□□□ 1.45
CCM2-206ENST00000474617 OLFML3Q9NRN5 406 aa24.12■■□□□ 1.45
CCM2-206ENST00000474617 ZNHIT6Q9NWK9 470 aaKnown RBP24.12■■□□□ 1.45
CCM2-206ENST00000474617 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.12■■□□□ 1.45
CCM2-206ENST00000474617 IPO5O00410 1097 aaKnown RBP24.11■■□□□ 1.45
CCM2-206ENST00000474617 CDK17Q00537 523 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 BMT2Q1RMZ1 405 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 ARSHQ5FYA8 562 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 STXBP4Q6ZWJ1 553 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 TBC1D5Q92609 795 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 WRNIP1Q96S55 665 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 TBC1D22BQ9NU19 505 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 FAM184BQ9ULE4 1060 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms