RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 RING1Q06587 406 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 MSMPQ1L6U9 139 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 CCDC57Q2TAC2 916 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 DEFB115Q30KQ5 88 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 TAF7LQ5H9L4 462 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 TOP6BLQ8N6T0 577 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 VGLL2Q8N8G2 317 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 KCT2Q8NC54 265 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 AGBL3Q8NEM8 1001 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 ZNF507Q8TCN5 953 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 MEIS3Q99687 375 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 ANKRD2Q9GZV1 360 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 COA1Q9GZY4 146 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 CD209Q9NNX6 404 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 MYOZ2Q9NPC6 264 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 CNNM1Q9NRU3 951 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 NOB1Q9ULX3 412 aaKnown RBP8.7□□□□□ -1.02
VPS50-211ENST00000474412 TLR6Q9Y2C9 796 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 SNCAIPQ9Y6H5 919 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 PHIPQ8WWQ0 1821 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 DOCK1Q14185 1865 aa8.7□□□□□ -1.02
VPS50-211ENST00000474412 F8W031 263 aaPredicted RBP8.69□□□□□ -1.02
VPS50-211ENST00000474412 NTF4P34130 210 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 GYG1P46976 350 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 RFX5P48382 616 aaPredicted RBP8.69□□□□□ -1.02
VPS50-211ENST00000474412 CDK8P49336 464 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 ETF1P62495 437 aaKnown RBP8.69□□□□□ -1.02
VPS50-211ENST00000474412 PRAMEF18Q5VWM3 479 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 MOB2Q70IA6 237 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 UBE3DQ7Z6J8 389 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 CDCA5Q96FF9 252 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 ANGEL1Q9UNK9 670 aaKnown RBP8.69□□□□□ -1.02
VPS50-211ENST00000474412 FZD1Q9UP38 647 aa8.69□□□□□ -1.02
VPS50-211ENST00000474412 WNT10BO00744 389 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 LEFTY1O75610 366 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 BCAR3O75815 825 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 HSPA8P11142 646 aaKnown RBP8.68□□□□□ -1.02
VPS50-211ENST00000474412 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 C15orf52Q6ZUT6 534 aaKnown RBP8.68□□□□□ -1.02
VPS50-211ENST00000474412 CYFIP1Q7L576 1253 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 DCPSQ96C86 337 aaKnown RBP8.68□□□□□ -1.02
VPS50-211ENST00000474412 DUSP23Q9BVJ7 150 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 ZC3H7BQ9UGR2 993 aaKnown RBP8.68□□□□□ -1.02
VPS50-211ENST00000474412 RIPOR2Q9Y4F9 1068 aa8.68□□□□□ -1.02
VPS50-211ENST00000474412 LRRFIP2Q9Y608 721 aaKnown RBP8.68□□□□□ -1.02
VPS50-211ENST00000474412 WNT11O96014 354 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 MYH8P13535 1937 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 TRIM27P14373 513 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 IL1R1P14778 569 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 HUNKP57058 714 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 ZNF804AQ7Z570 1209 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 RELL1Q8IUW5 271 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 PHC3Q8NDX5 983 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 NAV1Q8NEY1 1877 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 MYO3BQ8WXR4 1341 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 ZBED3Q96IU2 234 aaPredicted RBP8.67□□□□□ -1.02
VPS50-211ENST00000474412 KIF16BQ96L93 1317 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 PSMG3-AS1Q96PY0 264 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 SIL1Q9H173 461 aa8.67□□□□□ -1.02
VPS50-211ENST00000474412 GBA2Q9HCG7 927 aaPredicted RBP8.67□□□□□ -1.02
VPS50-211ENST00000474412 PA2G4Q9UQ80 394 aaKnown RBP8.67□□□□□ -1.02
VPS50-211ENST00000474412 MYH1P12882 1939 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 MGAMO43451 1857 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
VPS50-211ENST00000474412 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 CLRN2A0PK11 232 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 FAM155AB1AL88 458 aaPredicted RBP8.66□□□□□ -1.02
VPS50-211ENST00000474412 GBP2P32456 591 aaPredicted RBP8.66□□□□□ -1.02
VPS50-211ENST00000474412 LBX1P52954 281 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 TSNAXIP1Q2TAA8 658 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 ATG9AQ7Z3C6 839 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 FAM181AQ8N9Y4 354 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 FAM84BQ96KN1 310 aaPredicted RBP8.66□□□□□ -1.02
VPS50-211ENST00000474412 WNT10AQ9GZT5 417 aa8.66□□□□□ -1.02
VPS50-211ENST00000474412 FAM205AQ6ZU69 1335 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 MROH5Q6ZUA9 1318 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 CT47B1P0C2W7 299 aaPredicted RBP8.65□□□□□ -1.02
VPS50-211ENST00000474412 UBTFL1P0CB47 393 aaPredicted RBP8.65□□□□□ -1.02
VPS50-211ENST00000474412 GRK4P32298 578 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 GP2P55259 537 aaKnown RBP8.65□□□□□ -1.02
VPS50-211ENST00000474412 CHAF1AQ13111 956 aaPredicted RBP8.65□□□□□ -1.02
VPS50-211ENST00000474412 PWP1Q13610 501 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 UBE4AQ14139 1066 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 ARMCX6Q7L4S7 300 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 RASAL3Q86YV0 1011 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.02
VPS50-211ENST00000474412 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
VPS50-211ENST00000474412 ZBED9Q6R2W3 1325 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 EYA2O00167 538 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 LRIG2O94898 1065 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 PDE8BO95263 885 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 FGFR2P21802 821 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 ECE1P42892 770 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 RPL6Q02878 288 aaKnown RBP8.64□□□□□ -1.03
VPS50-211ENST00000474412 LMNB2Q03252 620 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms