RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 APOL5Q9BWW9 433 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 RC3H2Q9HBD1 1191 aaKnown RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 ARPP21Q9UBL0 812 aaPredicted RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
SIK3-208ENST00000472648 ZZEF1O43149 2961 aa6.95□□□□□ -1.3
SIK3-208ENST00000472648 GPR179Q6PRD1 2367 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 C2CD4DB7Z1M9 353 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 STK25O00506 426 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 NFIBO00712 420 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 SURF6O75683 361 aaKnown RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 ICAM1P05362 532 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ASGR2P07307 311 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 SLC1A4P43007 532 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ARHGAP8P85298 464 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 LMNB2Q03252 620 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ARHGAP1Q07960 439 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 COL9A3Q14050 684 aaPredicted RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 LY6KQ17RY6 165 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ANKRD54Q6NXT1 300 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 CTR9Q6PD62 1173 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 RNF207Q6ZRF8 634 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ZNF444Q8N0Y2 327 aaPredicted RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 TDRD5Q8NAT2 981 aaKnown RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 DNERQ8NFT8 737 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 VN1R2Q8NFZ6 395 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ATP8B4Q8TF62 1192 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 RIN2Q8WYP3 895 aaPredicted RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 ATP6V0A1Q93050 837 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 SECISBP2LQ93073 1101 aaKnown RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 MKL1Q969V6 931 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 CHMP4CQ96CF2 233 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 NECTIN4Q96NY8 510 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 FBXL21Q9UKT6 434 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 PRR12Q9ULL5 1215 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 MRPL42Q9Y6G3 142 aaKnown RBP6.94□□□□□ -1.3
SIK3-208ENST00000472648 SLC4A4Q9Y6R1 1079 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 ZBED9Q6R2W3 1325 aa6.94□□□□□ -1.3
SIK3-208ENST00000472648 IGKV6D-41A0A0C4DH26 115 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 HAS3O00219 553 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 GOLIM4O00461 696 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 KINO60870 393 aaKnown RBP6.93□□□□□ -1.3
SIK3-208ENST00000472648 PPFIA3O75145 1194 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 CAND2O75155 1236 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 NPR3P17342 541 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 HOXB8P17481 243 aaPredicted RBP6.93□□□□□ -1.3
SIK3-208ENST00000472648 EDNRBP24530 442 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 DUSP6Q16828 381 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 CES5AQ6NT32 575 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 LLGL2Q6P1M3 1020 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 SEPT14Q6ZU15 432 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 CMTR2Q8IYT2 770 aaKnown RBP6.93□□□□□ -1.3
SIK3-208ENST00000472648 EAF2Q96CJ1 260 aaPredicted RBP6.93□□□□□ -1.3
SIK3-208ENST00000472648 ZNF689Q96CS4 500 aaPredicted RBP6.93□□□□□ -1.3
SIK3-208ENST00000472648 GMCL1Q96IK5 515 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 DNAJC2Q99543 621 aaKnown RBP6.93□□□□□ -1.3
SIK3-208ENST00000472648 S1PR5Q9H228 398 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 POMKQ9H5K3 350 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 ZNF287Q9HBT7 754 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 MTMR4Q9NYA4 1195 aa6.93□□□□□ -1.3
SIK3-208ENST00000472648 WDFY3Q8IZQ1 3526 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 GREB1Q4ZG55 1949 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 C17orf102A2RUQ5 167 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 MINDY4BA8MYZ0 360 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 PLA2G6O60733 806 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 DGKIO75912 1065 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 MCCP23508 829 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 MTHFRP42898 656 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 RPS6P62753 249 aaKnown RBP6.92□□□□□ -1.3
SIK3-208ENST00000472648 UBE3AQ05086 875 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 TPRNQ4KMQ1 711 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 PAN2Q504Q3 1202 aaKnown RBP6.92□□□□□ -1.3
SIK3-208ENST00000472648 PPM1JQ5JR12 505 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 VARS2Q5ST30 1063 aaKnown RBP6.92□□□□□ -1.3
SIK3-208ENST00000472648 CCDC62Q6P9F0 684 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 SYCE2Q6PIF2 218 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 TMEM184AQ6ZMB5 413 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 ZDHHC14Q8IZN3 488 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 SIX5Q8N196 739 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 PLCD3Q8N3E9 789 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 SUMF1Q8NBK3 374 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 PPTC7Q8NI37 304 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 EMID1Q96A84 441 aaPredicted RBP6.92□□□□□ -1.3
SIK3-208ENST00000472648 OSBPL7Q9BZF2 842 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.92□□□□□ -1.3
SIK3-208ENST00000472648 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 ERVK-5Q9HDB9 667 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 RNF216Q9NWF9 866 aaPredicted RBP6.92□□□□□ -1.3
SIK3-208ENST00000472648 LIMD1Q9UGP4 676 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 USP18Q9UMW8 372 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 PLIN4Q96Q06 1357 aa6.92□□□□□ -1.3
SIK3-208ENST00000472648 DOCK8Q8NF50 2099 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 SOBPA7XYQ1 873 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 SP9P0CG40 484 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 TSPY3P0CV98 308 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 TSPY8P0CW00 308 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 KCNA4P22459 653 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 ADD2P35612 726 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms