RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 KIRREL1Q96J84 757 aa8.88□□□□□ -0.99
SCAF4-205ENST00000472318 LOC102724159A0A0B4J2E5 919 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 ERCC5P28715 1186 aaPredicted RBP8.87□□□□□ -0.99
SCAF4-205ENST00000472318 ALDH1B1P30837 517 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
SCAF4-205ENST00000472318 PWP1Q13610 501 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 PWP2Q15269 919 aaKnown RBP8.87□□□□□ -0.99
SCAF4-205ENST00000472318 ZNF124Q15973 351 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 GAB4Q2WGN9 574 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 KRT26Q7Z3Y9 468 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 KSR1Q8IVT5 923 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 BHLHE22Q8NFJ8 381 aaPredicted RBP8.87□□□□□ -0.99
SCAF4-205ENST00000472318 LIN37Q96GY3 246 aaPredicted RBP8.87□□□□□ -0.99
SCAF4-205ENST00000472318 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
SCAF4-205ENST00000472318 RIPOR2Q9Y4F9 1068 aa8.87□□□□□ -0.99
SCAF4-205ENST00000472318 SCN7AQ01118 1682 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 UPK3BL1B0FP48 263 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 UPK3BL2E5RIL1 263 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 PPIP5K2O43314 1243 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 FKTNO75072 461 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 STARD3NLO95772 234 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 SRFP11831 508 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 DTWD2Q8NBA8 298 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 MICAL1Q8TDZ2 1067 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 FAM84AQ96KN4 292 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 GPR62Q9BZJ7 368 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 DUSP15Q9H1R2 295 aaPredicted RBP8.86□□□□□ -0.99
SCAF4-205ENST00000472318 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 MYH16Q9H6N6 1097 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 SLAMF8Q9P0V8 285 aa8.86□□□□□ -0.99
SCAF4-205ENST00000472318 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
SCAF4-205ENST00000472318 POLR3KQ9Y2Y1 108 aaPredicted RBP8.86□□□□□ -0.99
SCAF4-205ENST00000472318 MUC3AQ02505 3323 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 TCERG1O14776 1098 aaKnown RBP8.85□□□□□ -0.99
SCAF4-205ENST00000472318 RAD17O75943 681 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 RECKO95980 971 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 GBP2P32456 591 aaPredicted RBP8.85□□□□□ -0.99
SCAF4-205ENST00000472318 IL6STP40189 918 aaPredicted RBP8.85□□□□□ -0.99
SCAF4-205ENST00000472318 PKN1Q16512 942 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 MLANAQ16655 118 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 TMED8Q6PL24 325 aaPredicted RBP8.85□□□□□ -0.99
SCAF4-205ENST00000472318 RELL1Q8IUW5 271 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 RNF141Q8WVD5 230 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 SIN3AQ96ST3 1273 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 TRIT1Q9H3H1 467 aaKnown RBP8.85□□□□□ -0.99
SCAF4-205ENST00000472318 REV1Q9UBZ9 1251 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 ZNRF3Q9ULT6 936 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 TRIM17Q9Y577 477 aa8.85□□□□□ -0.99
SCAF4-205ENST00000472318 DBX1A6NMT0 343 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 A1BGP04217 495 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 GARTP22102 1010 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 MPP2Q14168 576 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 TBC1D10BQ4KMP7 808 aaPredicted RBP8.84□□□□□ -0.99
SCAF4-205ENST00000472318 OTOP1Q7RTM1 612 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 ERMP1Q7Z2K6 904 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 ARMC5Q96C12 935 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 SLC38A3Q99624 504 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 TMEM59LQ9UK28 342 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 ANKRD26Q9UPS8 1709 aa8.84□□□□□ -0.99
SCAF4-205ENST00000472318 PAPPA2Q9BXP8 1791 aa8.84□□□□□ -1
SCAF4-205ENST00000472318 CDHR2Q9BYE9 1310 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 WASH4PA8MWX3 477 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 RNMTO43148 476 aaKnown RBP8.83□□□□□ -1
SCAF4-205ENST00000472318 HTR3BO95264 441 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 TPP2P29144 1249 aaPredicted RBP8.83□□□□□ -1
SCAF4-205ENST00000472318 TM4SF4P48230 202 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 FAM160A1Q05DH4 1040 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 CRY2Q49AN0 593 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 TMEM67Q5HYA8 995 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 RALGPS1Q5JS13 557 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 SNAP47Q5SQN1 464 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 REC114Q7Z4M0 266 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 GPATCH2Q9NW75 528 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 MRC1P22897 1456 aa8.83□□□□□ -1
SCAF4-205ENST00000472318 H7C1D1 291 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 RAB11FIP3O75154 756 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 PIP4K2AP48426 406 aaPredicted RBP8.82□□□□□ -1
SCAF4-205ENST00000472318 MOB2Q70IA6 237 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 TTC6Q86TZ1 520 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 TSPYL5Q86VY4 417 aaPredicted RBP8.82□□□□□ -1
SCAF4-205ENST00000472318 GOLM1Q8NBJ4 401 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 CDCA5Q96FF9 252 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 ZNF496Q96IT1 587 aaPredicted RBP8.82□□□□□ -1
SCAF4-205ENST00000472318 PRDM16Q9HAZ2 1276 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 METTL14Q9HCE5 456 aaKnown RBP8.82□□□□□ -1
SCAF4-205ENST00000472318 KCNQ5Q9NR82 932 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 KCNH3Q9ULD8 1083 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 KIAA0100Q14667 2235 aaKnown RBP8.82□□□□□ -1
SCAF4-205ENST00000472318 EYSQ5T1H1 3165 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 ABCC12Q96J65 1359 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
SCAF4-205ENST00000472318 ASTN2O75129 1339 aaPredicted RBP8.81□□□□□ -1
SCAF4-205ENST00000472318 TLDC2A0PJX2 215 aa8.81□□□□□ -1
SCAF4-205ENST00000472318 YDJCA8MPS7 323 aa8.81□□□□□ -1
SCAF4-205ENST00000472318 DNAJA2O60884 412 aa8.81□□□□□ -1
SCAF4-205ENST00000472318 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
SCAF4-205ENST00000472318 CAP1Q01518 475 aa8.81□□□□□ -1
SCAF4-205ENST00000472318 MPZL3Q6UWV2 235 aa8.81□□□□□ -1
SCAF4-205ENST00000472318 PRR23BQ6ZRT6 265 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms