RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 RPS12P25398 132 aaKnown RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 RPA1P27694 616 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 HNRNPH3P31942 346 aaKnown RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 CYLC1P35663 651 aaPredicted RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 KRT83P78385 493 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 FKBP3Q00688 224 aaKnown RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 GPBP1Q86WP2 473 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 HAUS4Q9H6D7 363 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 MYOZ2Q9NPC6 264 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 AGPAT5Q9NUQ2 364 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 ZBTB21Q9ULJ3 1066 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 SIK3Q9Y2K2 1263 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 PCDHA2Q9Y5H9 948 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 FAM86B1E9PN63 330 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 PLA2G6O60733 806 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 SSBP05455 408 aaKnown RBP eCLIP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 FAM86B2P0C5J1 330 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 RSRC2Q7L4I2 434 aaKnown RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 PCMTD1Q96MG8 357 aaPredicted RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 CEP63Q96MT8 703 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 ARGLU1Q9NWB6 273 aaPredicted RBP20.65■□□□□ 0.9
COL20A1-205ENST00000471582 CDC23Q9UJX2 597 aa20.65■□□□□ 0.9
COL20A1-205ENST00000471582 STAT3P40763 770 aa20.64■□□□□ 0.89
COL20A1-205ENST00000471582 ECE1P42892 770 aa20.64■□□□□ 0.89
COL20A1-205ENST00000471582 KLK7P49862 253 aa20.64■□□□□ 0.89
COL20A1-205ENST00000471582 ARHGAP27Q6ZUM4 889 aa20.64■□□□□ 0.89
COL20A1-205ENST00000471582 SPICE1Q8N0Z3 855 aa20.64■□□□□ 0.89
COL20A1-205ENST00000471582 ZBED3Q96IU2 234 aaPredicted RBP20.64■□□□□ 0.89
COL20A1-205ENST00000471582 FHDC1Q9C0D6 1143 aaPredicted RBP20.64■□□□□ 0.89
COL20A1-205ENST00000471582 FZD9O00144 591 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 WNT10BO00744 389 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 TUBB4BP68371 445 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 KIF4BQ2VIQ3 1234 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 CATSPER3Q86XQ3 398 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 SLC35F6Q8N357 371 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 GPR161Q8N6U8 529 aaKnown RBP20.63■□□□□ 0.89
COL20A1-205ENST00000471582 GLIS3Q8NEA6 775 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 CHURC1Q8WUH1 139 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 NAPGQ99747 312 aaPredicted RBP20.63■□□□□ 0.89
COL20A1-205ENST00000471582 SH2D4AQ9H788 454 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 POTEFA5A3E0 1075 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 EIF3CLB5ME19 914 aaKnown RBP20.63■□□□□ 0.89
COL20A1-205ENST00000471582 GNA14O95837 355 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 POTEIP0CG38 1075 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 PRELPP51888 382 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 LRRC41Q15345 812 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 POTEGQ6S5H5 508 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 POTEEQ6S8J3 1075 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 ACER1Q8TDN7 264 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 RABGGTAQ92696 567 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 GOLGA1Q92805 767 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 EIF3CQ99613 913 aaKnown RBP20.63■□□□□ 0.89
COL20A1-205ENST00000471582 EDEM3Q9BZQ6 932 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 VAV3Q9UKW4 847 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 PLAGL2Q9UPG8 496 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 DNM3Q9UQ16 869 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 COL4A3BPQ9Y5P4 624 aa20.63■□□□□ 0.89
COL20A1-205ENST00000471582 NKRFO15226 690 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL20A1-205ENST00000471582 MSH4O15457 936 aa20.62■□□□□ 0.89
COL20A1-205ENST00000471582 IPO7O95373 1038 aaKnown RBP20.62■□□□□ 0.89
COL20A1-205ENST00000471582 MARSP56192 900 aaKnown RBP20.62■□□□□ 0.89
COL20A1-205ENST00000471582 ARSHQ5FYA8 562 aa20.62■□□□□ 0.89
COL20A1-205ENST00000471582 NCAPH2Q6IBW4 605 aa20.62■□□□□ 0.89
COL20A1-205ENST00000471582 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
COL20A1-205ENST00000471582 ZC3H3Q8IXZ2 948 aaKnown RBP20.62■□□□□ 0.89
COL20A1-205ENST00000471582 CEP112Q8N8E3 955 aa20.62■□□□□ 0.89
COL20A1-205ENST00000471582 SYT2Q8N9I0 419 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-205ENST00000471582 EHBP1Q8NDI1 1231 aa20.62■□□□□ 0.89
COL20A1-205ENST00000471582 RANBP17Q9H2T7 1088 aaKnown RBP20.62■□□□□ 0.89
COL20A1-205ENST00000471582 SPATA31C1P0DKV0 1188 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 HOXA13P31271 388 aaPredicted RBP20.61■□□□□ 0.89
COL20A1-205ENST00000471582 HERVK_113P62684 666 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 HERC4Q5GLZ8 1057 aaPredicted RBP20.61■□□□□ 0.89
COL20A1-205ENST00000471582 KIAA1755Q5JYT7 1200 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 FAM83BQ5T0W9 1011 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 SRGAP1Q7Z6B7 1085 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 FAM160B2Q86V87 743 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 POLR3CQ9BUI4 534 aaPredicted RBP20.61■□□□□ 0.89
COL20A1-205ENST00000471582 TMEM39BQ9GZU3 492 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 VCPKMTQ9H867 229 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 NHEJ1Q9H9Q4 299 aaPredicted RBP20.61■□□□□ 0.89
COL20A1-205ENST00000471582 ZNF280AP59817 542 aaPredicted RBP20.61■□□□□ 0.89
COL20A1-205ENST00000471582 TNFAIP1Q13829 316 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 NBPF9Q3BBW0 867 aa20.61■□□□□ 0.89
COL20A1-205ENST00000471582 IGLV3-22A0A075B6J6 115 aa20.6■□□□□ 0.89
COL20A1-205ENST00000471582 ABL1P00519 1130 aa20.6■□□□□ 0.89
COL20A1-205ENST00000471582 KRT18P05783 430 aaKnown RBP20.6■□□□□ 0.89
COL20A1-205ENST00000471582 CLCN6P51797 869 aa20.6■□□□□ 0.89
COL20A1-205ENST00000471582 EDRF1Q3B7T1 1238 aa20.6■□□□□ 0.89
COL20A1-205ENST00000471582 SCFD1Q8WVM8 642 aa20.6■□□□□ 0.89
COL20A1-205ENST00000471582 KCTD10Q9H3F6 313 aa20.6■□□□□ 0.89
COL20A1-205ENST00000471582 TRAF5O00463 557 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 KRT86O43790 486 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 ZNF76P36508 570 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 MAP3K10Q02779 954 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 WHAMMP3Q1A5X7 153 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 UIMC1Q96RL1 719 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 EHMT1Q9H9B1 1298 aa20.59■□□□□ 0.89
COL20A1-205ENST00000471582 EMILIN3Q9NT22 766 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms