RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 LAMB2P55268 1798 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 IBTKQ9P2D0 1353 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 LTBP3Q9NS15 1303 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 IQCA1LA6NCM1 817 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 F6X3S4 739 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 ENC1O14682 589 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 SEMA7AO75326 666 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 BBOX1O75936 387 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 IGHA2P01877 340 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 TRIM27P14373 513 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 EPHX2P34913 555 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 DLG4P78352 724 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 GPSM2P81274 684 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 TNK2Q07912 1038 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 FSTL1Q12841 308 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 SLBPQ14493 270 aaKnown RBP eCLIP4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 CCDC152Q4G0S7 254 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 SLC10A5Q5PT55 438 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 KSR2Q6VAB6 950 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 UBE3BQ7Z3V4 1068 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 ZNF605Q86T29 641 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 IRF2BP1Q8IU81 584 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 CREG2Q8IUH2 290 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 HID1Q8IV36 788 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 ITPRIPQ8IWB1 547 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 SP8Q8IXZ3 490 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 LILRA2Q8N149 483 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 OXR1Q8N573 874 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 ZBTB38Q8NAP3 1195 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 SUPT20HQ8NEM7 779 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 ARHGAP45Q92619 1136 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 PSMD1Q99460 953 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 API5Q9BZZ5 524 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 WNT10AQ9GZT5 417 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 RWDD1Q9H446 243 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 DBNDD1Q9H9R9 158 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 FBRSQ9HAH7 460 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 CYP8B1Q9UNU6 501 aa4.84□□□□□ -1.63
GTF3C3-210ENST00000470386 DICER1Q9UPY3 1922 aaKnown RBP4.84□□□□□ -1.64
GTF3C3-210ENST00000470386 PTPRCP08575 1304 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 A0A0G2JLL6 359 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 PDE8AO60658 829 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 VAMP4O75379 141 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 PAGE1O75459 146 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 UFL1O94874 794 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 ESR1P03372 595 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 PCCAP05165 728 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 HSP90B1P14625 803 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 TRHRP34981 398 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 CAP2P40123 477 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 EPS15P42566 896 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 RPS8P62241 208 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 LRFN4Q6PJG9 635 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 ANKRD18AQ8IVF6 992 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 TMEM151BQ8IW70 566 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 GPC2Q8N158 579 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 CCDC82Q8N4S0 544 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 CCDC191Q8NCU4 936 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 PDZD8Q8NEN9 1154 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 RIN3Q8TB24 985 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 PIWIL2Q8TC59 973 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 DNAAF4Q8WXU2 420 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 RBCK1Q9BYM8 510 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 MCOLN1Q9GZU1 580 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 ADAMTS10Q9H324 1103 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 TRIT1Q9H3H1 467 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 TAF1DQ9H5J8 278 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 ZNF408Q9H9D4 720 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 PPM1HQ9ULR3 514 aa4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 NOB1Q9ULX3 412 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 DDX60Q8IY21 1712 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-210ENST00000470386 SPEF2Q9C093 1822 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 SHTN1A0MZ66 631 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 FZD9O00144 591 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 PEX10O60683 326 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 FBXO24O75426 580 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 IGKV5-2P06315 115 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 RLBP1P12271 317 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 IGHMBP2P38935 993 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 KCNJ4P48050 445 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 GMPSP49915 693 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 FMR1Q06787 632 aaKnown RBP eCLIP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 CXCL9Q07325 125 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 HDAC1Q13547 482 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 INPP5AQ14642 412 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 TNIP1Q15025 636 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 SF3B3Q15393 1217 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 NKG7Q16617 165 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 TAF7LQ5H9L4 462 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 PRAMEF13Q5VWM6 474 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 PNMA8AQ86V59 439 aaPredicted RBP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 CNTROBQ8N137 903 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 PLPPR2Q96GM1 343 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 BORCS6Q96GS4 357 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 KCNC2Q96PR1 638 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 EYA3Q99504 573 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 MPHOSPH8Q99549 860 aa4.82□□□□□ -1.64
GTF3C3-210ENST00000470386 BACH2Q9BYV9 841 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms