RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 APBA1Q02410 837 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 SPIRE1Q08AE8 756 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 IKQ13123 557 aaPredicted RBP16.27■□□□□ 0.19
CBWD3-205ENST00000469687 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.19
CBWD3-205ENST00000469687 PAPD7Q5XG87 772 aaKnown RBP16.27■□□□□ 0.19
CBWD3-205ENST00000469687 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 LENG9Q96B70 501 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 MBOAT7Q96N66 472 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 MRIQ9BWK5 157 aa16.27■□□□□ 0.19
CBWD3-205ENST00000469687 A0A1W2PRG0 241 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 MAP2K7O14733 419 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 OPLAHO14841 1288 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 PLSCR1O15162 318 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 HOXA13P31271 388 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 FKBP3Q00688 224 aaKnown RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 HERC4Q5GLZ8 1057 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 CYP2W1Q8TAV3 490 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 ZHX3Q9H4I2 956 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 COL4A3BPQ9Y5P4 624 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 CASP5P51878 434 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 SLC12A3P55017 1021 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 CCDC84Q86UT8 332 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 BCAS3Q9H6U6 928 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 NLRC4Q9NPP4 1024 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
CBWD3-205ENST00000469687 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
CBWD3-205ENST00000469687 H0YIN7 160 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 H3BQF6 201 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
CBWD3-205ENST00000469687 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
CBWD3-205ENST00000469687 KIF5AQ12840 1032 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 SPA17Q15506 151 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 SYDE2Q5VT97 1194 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 SLC30A10Q6XR72 485 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 GMCL1P1Q8NEA9 526 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 HNRNPLLQ8WVV9 542 aaKnown RBP16.25■□□□□ 0.19
CBWD3-205ENST00000469687 CRACR2AQ9BSW2 395 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 KCTD10Q9H3F6 313 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 PCDHA13Q9Y5I0 950 aa16.25■□□□□ 0.19
CBWD3-205ENST00000469687 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 NOL4O94818 638 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 SPATA31C1P0DKV0 1188 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 FKBP1AP62942 108 aaKnown RBP16.24■□□□□ 0.19
CBWD3-205ENST00000469687 PABPC4Q13310 644 aaKnown RBP eCLIP16.24■□□□□ 0.19
CBWD3-205ENST00000469687 AP3B2Q13367 1082 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
CBWD3-205ENST00000469687 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 NAP1L4Q99733 375 aaKnown RBP16.24■□□□□ 0.19
CBWD3-205ENST00000469687 DEF6Q9H4E7 631 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 POLD4Q9HCU8 107 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 EMILIN3Q9NT22 766 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 KRT18P05783 430 aaKnown RBP16.24■□□□□ 0.19
CBWD3-205ENST00000469687 ECE1P42892 770 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 GFPT1Q06210 699 aaPredicted RBP16.24■□□□□ 0.19
CBWD3-205ENST00000469687 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 PDXDC1Q6P996 788 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 SLFN12Q8IYM2 578 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 NEK11Q8NG66 645 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 SALL4Q9UJQ4 1053 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 L1RE1Q9UN81 338 aa16.24■□□□□ 0.19
CBWD3-205ENST00000469687 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 AKR1B10O60218 316 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 MOCS3O95396 460 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 BMP3P12645 472 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 GYS2P54840 703 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 CYP4A11Q02928 519 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 HGSNATQ68CP4 663 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 IQCDQ96DY2 449 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 CSRNP1Q96S65 589 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 SH2D4AQ9H788 454 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 JADE2Q9NQC1 790 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 TLR2O60603 784 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 KIF20AO95235 890 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 FOXR2Q6PJQ5 311 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-205ENST00000469687 ATRNL1Q5VV63 1379 aa16.23■□□□□ 0.19
CBWD3-205ENST00000469687 ATAD5Q96QE3 1844 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 MSH4O15457 936 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 LCA5LO95447 670 aa16.22■□□□□ 0.19
CBWD3-205ENST00000469687 SREBF1P36956 1147 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms