RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 MEIS1O00470 390 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 MATN3O15232 486 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 DBHP09172 617 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 CTSHP09668 335 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 ATF2P15336 505 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 HMGB2P26583 209 aaKnown RBP6.88□□□□□ -1.31
VPS8-219ENST00000469479 CNR2P34972 360 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 CTSKP43235 329 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 GJA9P57773 515 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 KCNA1Q09470 495 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 CPZQ66K79 652 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 JAMLQ86YT9 394 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 FBXO27Q8NI29 283 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 DDX1Q92499 740 aaKnown RBP6.88□□□□□ -1.31
VPS8-219ENST00000469479 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 GFOD1Q9NXC2 390 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 FBXL21Q9UKT6 434 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 PCDHB14Q9Y5E9 798 aa6.88□□□□□ -1.31
VPS8-219ENST00000469479 RGPD8O14715 1765 aaPredicted RBP6.87□□□□□ -1.31
VPS8-219ENST00000469479 USP19O94966 1318 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 GSNP06396 782 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 NCAM1P13591 858 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 POLR2BP30876 1174 aaKnown RBP6.87□□□□□ -1.31
VPS8-219ENST00000469479 ITGAEP38570 1179 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 PRELPP51888 382 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 RGL3Q3MIN7 710 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 OVOS1Q6IE37 1185 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 CARFQ8N187 725 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 TTC9BQ8N6N2 239 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 NAT16Q8N8M0 369 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 RBM15Q96T37 977 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS8-219ENST00000469479 C1QTNF3Q9BXJ4 246 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 LRRC3Q9BY71 257 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 MKRN2Q9H000 416 aaKnown RBP6.87□□□□□ -1.31
VPS8-219ENST00000469479 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 DUSP10Q9Y6W6 482 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 LMO7Q8WWI1 1683 aa6.87□□□□□ -1.31
VPS8-219ENST00000469479 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 SAFB2Q14151 953 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS8-219ENST00000469479 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 ATG4CQ96DT6 458 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 ZNF512BQ96KM6 892 aaPredicted RBP6.86□□□□□ -1.31
VPS8-219ENST00000469479 SAMD11Q96NU1 681 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 MENTQ9BUN1 341 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 ITSN1Q15811 1721 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 LRRC37A3O60309 1634 aa6.86□□□□□ -1.31
VPS8-219ENST00000469479 POLR3AO14802 1390 aaPredicted RBP6.85□□□□□ -1.31
VPS8-219ENST00000469479 ADCY9O60503 1353 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 TLR3O15455 904 aaKnown RBP6.85□□□□□ -1.31
VPS8-219ENST00000469479 GARTP22102 1010 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 PRR5P85299 388 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 AUHQ13825 339 aaKnown RBP6.85□□□□□ -1.31
VPS8-219ENST00000469479 RTP2Q5QGT7 225 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 BICRALQ6AI39 1079 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 CRTC3Q6UUV7 619 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 CYP2R1Q6VVX0 501 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 NLRC3Q7RTR2 1065 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 BRMS1Q9HCU9 246 aa6.85□□□□□ -1.31
VPS8-219ENST00000469479 F8W031 263 aaPredicted RBP6.84□□□□□ -1.31
VPS8-219ENST00000469479 GCP02774 474 aa6.84□□□□□ -1.31
VPS8-219ENST00000469479 CORO7P57737 925 aa6.84□□□□□ -1.31
VPS8-219ENST00000469479 DLX2Q07687 328 aaPredicted RBP6.84□□□□□ -1.31
VPS8-219ENST00000469479 CWF19L1Q69YN2 538 aaKnown RBP6.84□□□□□ -1.31
VPS8-219ENST00000469479 TOM1L2Q6ZVM7 507 aa6.84□□□□□ -1.31
VPS8-219ENST00000469479 B3GNT8Q7Z7M8 397 aa6.84□□□□□ -1.31
VPS8-219ENST00000469479 DBR1Q9UK59 544 aaKnown RBP6.84□□□□□ -1.31
VPS8-219ENST00000469479 HCFC2Q9Y5Z7 792 aa6.84□□□□□ -1.31
VPS8-219ENST00000469479 SBF2Q86WG5 1849 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 WDR17Q8IZU2 1322 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 ANKRD33BA6NCL7 494 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 EXOC5O00471 708 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 GSTM1P09488 218 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 DSCC1Q9BVC3 393 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 HIRIP3Q9BW71 556 aaPredicted RBP6.83□□□□□ -1.32
VPS8-219ENST00000469479 KCNQ5Q9NR82 932 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 TOPAZ1Q8N9V7 1692 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 PAPPAQ13219 1627 aa6.83□□□□□ -1.32
VPS8-219ENST00000469479 CCDC7Q96M83 1385 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 LOC105371045A0A1W2PR82 267 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 TOMM70O94826 608 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 ASGR2P07307 311 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 ZNF20P17024 532 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
VPS8-219ENST00000469479 LRRFIP1Q32MZ4 808 aaKnown RBP6.82□□□□□ -1.32
VPS8-219ENST00000469479 TMEM192Q8IY95 271 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 DNAJC5GQ8N7S2 189 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 JMYQ8N9B5 988 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 NLGN2Q8NFZ4 835 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 SLC12A9Q9BXP2 914 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
VPS8-219ENST00000469479 NTMQ9P121 344 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 TNS2Q63HR2 1409 aa6.82□□□□□ -1.32
VPS8-219ENST00000469479 ACEP12821 1306 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 NOP2P46087 812 aaKnown RBP6.81□□□□□ -1.32
VPS8-219ENST00000469479 FBXL19Q6PCT2 694 aa6.81□□□□□ -1.32
VPS8-219ENST00000469479 TTLL7Q6ZT98 887 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms