RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 UMODL1Q5DID0 1318 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 HAS3O00219 553 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 CD2BP2O95400 341 aaKnown RBP16.54■□□□□ 0.24
COL27A1-203ENST00000468565 FOSP01100 380 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-203ENST00000468565 SCG2P13521 617 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 PSEN2P49810 448 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 AP3B2Q13367 1082 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 NTRK3Q16288 839 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
COL27A1-203ENST00000468565 RNPC3Q96LT9 517 aaKnown RBP16.54■□□□□ 0.24
COL27A1-203ENST00000468565 WNT8AQ9H1J5 351 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 IL23AQ9NPF7 189 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 UBIAD1Q9Y5Z9 338 aa16.54■□□□□ 0.24
COL27A1-203ENST00000468565 ESYT2A0FGR8 921 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 SMCO2A6NFE2 343 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 ST18O60284 1047 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 ZNF286BP0CG31 522 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 ANAPC15P60006 121 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 MFSD10Q14728 455 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 PSRC1Q6PGN9 363 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-203ENST00000468565 CCDC12Q8WUD4 166 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-203ENST00000468565 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.53■□□□□ 0.241e-23■□□□□ 9.7
COL27A1-203ENST00000468565 RNF26Q9BY78 433 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-203ENST00000468565 MAFGO15525 162 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 SORBS3O60504 671 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 CYP2C9P11712 490 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 IFNAR1P17181 557 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 ITGB5P18084 799 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
COL27A1-203ENST00000468565 PKN1Q16512 942 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 PTGISQ16647 500 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 TMEM240Q5SV17 173 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 C16orf59Q7L2K0 433 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
COL27A1-203ENST00000468565 C16orf70Q9BSU1 422 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
COL27A1-203ENST00000468565 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
COL27A1-203ENST00000468565 LAMA2P24043 3122 aaKnown RBP16.52■□□□□ 0.24
COL27A1-203ENST00000468565 PITPNM1O00562 1244 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.23
COL27A1-203ENST00000468565 SMAD3P84022 425 aaKnown RBP16.52■□□□□ 0.23
COL27A1-203ENST00000468565 AKAP17AQ02040 695 aaKnown RBP16.52■□□□□ 0.23
COL27A1-203ENST00000468565 CYFIP1Q7L576 1253 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 C7orf31Q8N865 590 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 PPP1R13LQ8WUF5 828 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 ANO3Q9BYT9 981 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 ZMYND12Q9H0C1 365 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 BCAS3Q9H6U6 928 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 JADE2Q9NQC1 790 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 PDRG1Q9NUG6 133 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 NOD1Q9Y239 953 aa16.52■□□□□ 0.23
COL27A1-203ENST00000468565 CCL23P55773 120 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 BFSP2Q13515 415 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 MTMR1Q13613 665 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 FAM109BQ6ICB4 259 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-203ENST00000468565 GDF6Q6KF10 455 aaPredicted RBP16.51■□□□□ 0.23
COL27A1-203ENST00000468565 PHKBQ93100 1093 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 GPR20Q99678 358 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 HDAC6Q9UBN7 1215 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 GBF1Q92538 1859 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 LGALS2P05162 132 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 KCNA2P16389 499 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 SREBF1P36956 1147 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 CCT2P78371 535 aaKnown RBP16.51■□□□□ 0.23
COL27A1-203ENST00000468565 RASIP1Q5U651 963 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 RPUSD2Q8IZ73 545 aaKnown RBP16.51■□□□□ 0.23
COL27A1-203ENST00000468565 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 CTAGE1Q96RT6 745 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
COL27A1-203ENST00000468565 C6orf50Q9HD87 102 aa16.51■□□□□ 0.23
COL27A1-203ENST00000468565 PFKMP08237 780 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 ACRP10323 421 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 ZNF365Q70YC5 407 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 SLC26A6Q9BXS9 759 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 TET1Q8NFU7 2136 aa16.5■□□□□ 0.23
COL27A1-203ENST00000468565 H3BRB1 525 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 ATP9AO75110 1047 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 PTMSP20962 102 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 GNA11P29992 359 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 RFC2P35250 354 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 RBL2Q08999 1139 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 RETREG2Q8NC44 543 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 SCLYQ96I15 445 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 TUT1Q9H6E5 874 aaKnown RBP16.49■□□□□ 0.23
COL27A1-203ENST00000468565 TMEM260Q9NX78 707 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-203ENST00000468565 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-203ENST00000468565 FGBP02675 491 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 TRIM22Q8IYM9 498 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms