RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 ATG7O95352 703 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 FGAP02671 866 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 CA3P07451 260 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 FGRP09769 529 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 ATICP31939 592 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 SPRED2Q7Z698 418 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 CCDC91Q7Z6B0 441 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 FILIP1Q7Z7B0 1213 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 TBC1D10CQ8IV04 446 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 TTC30BQ8N4P2 665 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 REPS2Q8NFH8 660 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 CCDC47Q96A33 483 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 SCLYQ96I15 445 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 LZTS2Q9BRK4 669 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 TRPV6Q9H1D0 765 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 UPF3AQ9H1J1 476 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 WNT8AQ9H1J5 351 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 MTIF3Q9H2K0 278 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 CWC15Q9P013 229 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 ZNF214Q9UL59 606 aaPredicted RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 ISY1Q9ULR0 285 aaKnown RBP8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 ADAMTS5Q9UNA0 930 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 TMX2Q9Y320 296 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 PCDHA11Q9Y5I1 949 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 SLC4A7Q9Y6M7 1214 aa8.3□□□□□ -1.08
RPUSD3-212ENST00000466141 NEDD4P46934 1319 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 TMCO5BA8MYB1 307 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 GOLGA6L6A8MZA4 724 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 RBAK-RBAKDNI3L0D1 243 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 WDR46O15213 610 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 SGSM2O43147 1006 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 TIMM44O43615 452 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 ORC4O43929 436 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 ATP2A2P16615 1042 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 NOP2P46087 812 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 MRE11P49959 708 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 GABPB1Q06547 395 aaPredicted RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 ACVR2BQ13705 512 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 TTLL4Q14679 1199 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 ZSCAN26Q16670 478 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 TSNAXIP1Q2TAA8 658 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 PLEKHG6Q3KR16 790 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 GNASQ5JWF2 1037 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 FAM83BQ5T0W9 1011 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 RNF187Q5TA31 235 aaPredicted RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 CXCL17Q6UXB2 119 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 ZSCAN30Q86W11 494 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 STK11IPQ8N1F8 1099 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 FAM184AQ8NB25 1140 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 PCSK9Q8NBP7 692 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 NEDD1Q8NHV4 660 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 STAG1Q8WVM7 1258 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 DHX38Q92620 1227 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 FGD4Q96M96 766 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 NUP88Q99567 741 aaPredicted RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 NOC4LQ9BVI4 516 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 SEZ6LQ9BYH1 1024 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 IQCGQ9H095 443 aaKnown RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 IFT122Q9HBG6 1241 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 RIPK3Q9Y572 518 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 MCM3APO60318 1980 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 LCTP09848 1927 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 ASTN1O14525 1302 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
RPUSD3-212ENST00000466141 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 SKILP12757 684 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 EEF2P13639 858 aaKnown RBP8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 NOVP48745 357 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 TRPC1P48995 793 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 GJA9P57773 515 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 HAND2P61296 217 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 PSMC6P62333 389 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 PDE4BQ07343 736 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 TCEAL1Q15170 157 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 NFKBIBQ15653 356 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 FILIP1LQ4L180 1135 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 MAMDC4Q6UXC1 1216 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 ZNF771Q7L3S4 317 aaPredicted RBP8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 ARNTL2Q8WYA1 636 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 BHMTQ93088 406 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 DDX11Q96FC9 970 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 CEP95Q96GE4 821 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 RPS6KC1Q96S38 1066 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 SH2D4AQ9H788 454 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 KANSL2Q9H9L4 492 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 MKNK2Q9HBH9 465 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 ZNF287Q9HBT7 754 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 NYAP2Q9P242 653 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 ODF2LQ9ULJ1 636 aa8.28□□□□□ -1.08
RPUSD3-212ENST00000466141 COL4A4P53420 1690 aaPredicted RBP8.27□□□□□ -1.08
RPUSD3-212ENST00000466141 ERICH4A6NGS2 130 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms