RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 FTSJ1Q9UET6 329 aa6.5□□□□□ -1.37
LRCH3-211ENST00000466054 ZNF202O95125 648 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 AMPD2Q01433 879 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 NRN1LQ496H8 165 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 MILR1Q7Z6M3 343 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 ZNF575Q86XF7 245 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 FAM126BQ8IXS8 530 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 SEC14L1Q92503 715 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 SRPK1Q96SB4 655 aaKnown RBP6.49□□□□□ -1.37
LRCH3-211ENST00000466054 ZSWIM4Q9H7M6 989 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 BARX1Q9HBU1 254 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-211ENST00000466054 SNTG2Q9NY99 539 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 CDK11AQ9UQ88 783 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-211ENST00000466054 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
LRCH3-211ENST00000466054 C7orf72A4D263 438 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 IQCA1LA6NCM1 817 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 AGRPO00253 132 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 VAMP4O75379 141 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
LRCH3-211ENST00000466054 FOXE3Q13461 319 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 PRKD1Q15139 912 aaPredicted RBP6.48□□□□□ -1.37
LRCH3-211ENST00000466054 CRACR2BQ8N4Y2 399 aaPredicted RBP6.48□□□□□ -1.37
LRCH3-211ENST00000466054 ZNF513Q8N8E2 541 aaPredicted RBP6.48□□□□□ -1.37
LRCH3-211ENST00000466054 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 FGD4Q96M96 766 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 ZSWIM3Q96MP5 696 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
LRCH3-211ENST00000466054 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 CEP89Q96ST8 783 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 MCMBPQ9BTE3 642 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 CROTQ9UKG9 612 aa6.48□□□□□ -1.37
LRCH3-211ENST00000466054 SGSM2O43147 1006 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 SLC10A6Q3KNW5 377 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 PKN3Q6P5Z2 889 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 POMZP3Q6PJE2 187 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 ARHGEF39Q8N4T4 335 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 BVESQ8NE79 360 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 Q8TCH9 128 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 SGSM3Q96HU1 749 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 PTPN18Q99952 460 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 SUGT1Q9Y2Z0 365 aa6.47□□□□□ -1.37
LRCH3-211ENST00000466054 MCM7P33993 719 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 GRB10Q13322 594 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
LRCH3-211ENST00000466054 SV2CQ496J9 727 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 MTERF2Q49AM1 385 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 NOP9Q86U38 636 aaKnown RBP6.46□□□□□ -1.38
LRCH3-211ENST00000466054 KLHL36Q8N4N3 616 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 MBD6Q96DN6 1003 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 WRNIP1Q96S55 665 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 APEX2Q9UBZ4 518 aa6.46□□□□□ -1.38
LRCH3-211ENST00000466054 FAM221BA6H8Z2 402 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 CCDC85CA6NKD9 419 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 C22orf46C9J442 243 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 NOP56O00567 594 aaKnown RBP6.45□□□□□ -1.38
LRCH3-211ENST00000466054 THBDP07204 575 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 ADAM9Q13443 819 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 RNF207Q6ZRF8 634 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 TEX2Q8IWB9 1127 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 LRRC47Q8N1G4 583 aaKnown RBP6.45□□□□□ -1.38
LRCH3-211ENST00000466054 ADOQ96SZ5 270 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 CGGBP1Q9UFW8 167 aaPredicted RBP6.45□□□□□ -1.38
LRCH3-211ENST00000466054 EMC9Q9Y3B6 208 aa6.45□□□□□ -1.38
LRCH3-211ENST00000466054 TRMT10BQ6PF06 316 aaKnown RBP6.44□□□□□ -1.38
LRCH3-211ENST00000466054 PLEKHO2Q8TD55 490 aa6.44□□□□□ -1.38
LRCH3-211ENST00000466054 TRIM8Q9BZR9 551 aa6.44□□□□□ -1.38
LRCH3-211ENST00000466054 PIF1Q9H611 641 aa6.44□□□□□ -1.38
LRCH3-211ENST00000466054 CLEC1BQ9P126 229 aa6.44□□□□□ -1.38
LRCH3-211ENST00000466054 LRP2BPQ9P2M1 347 aa6.44□□□□□ -1.38
LRCH3-211ENST00000466054 AKT3Q9Y243 479 aa6.44□□□□□ -1.38
LRCH3-211ENST00000466054 SLC6A11P48066 632 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 NANOS3P60323 173 aaKnown RBP6.43□□□□□ -1.38
LRCH3-211ENST00000466054 DPTQ07507 201 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 NFATC3Q12968 1075 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 MIIPQ5JXC2 388 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 ZNF227Q86WZ6 799 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 TRIM59Q8IWR1 403 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 DNAJC10Q8IXB1 793 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 GIMAP8Q8ND71 665 aaPredicted RBP6.43□□□□□ -1.38
LRCH3-211ENST00000466054 PPP1R14AQ96A00 147 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 MRGPRX3Q96LB0 322 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 IKZF4Q9H2S9 585 aa6.43□□□□□ -1.38
LRCH3-211ENST00000466054 ITGAVP06756 1048 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 MLLT6P55198 1093 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-211ENST00000466054 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
LRCH3-211ENST00000466054 HSP90AA2PQ14568 343 aaPredicted RBP6.42□□□□□ -1.38
LRCH3-211ENST00000466054 LONRF2Q1L5Z9 754 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 CR1LQ2VPA4 569 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 USP39Q53GS9 565 aaKnown RBP6.42□□□□□ -1.38
LRCH3-211ENST00000466054 ZC3H12BQ5HYM0 836 aaKnown RBP6.42□□□□□ -1.38
LRCH3-211ENST00000466054 SPATC1Q76KD6 591 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 JMYQ8N9B5 988 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 TMEM209Q96SK2 561 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 DNAJC7Q99615 494 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 SPATA9Q9BWV2 254 aa6.42□□□□□ -1.38
LRCH3-211ENST00000466054 A0A1W2PQU0 124 aa6.41□□□□□ -1.38
LRCH3-211ENST00000466054 PTH1RQ03431 593 aa6.41□□□□□ -1.38
LRCH3-211ENST00000466054 MROH9Q5TGP6 573 aa6.41□□□□□ -1.38
LRCH3-211ENST00000466054 RALYLQ86SE5 291 aaKnown RBP6.41□□□□□ -1.38
LRCH3-211ENST00000466054 TOE1Q96GM8 510 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms