RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 C7orf31Q8N865 590 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 AFG1LQ8WV93 481 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 TOP1MTQ969P6 601 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 RMDN1Q96DB5 314 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 RPGRIP1Q96KN7 1286 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 FAM227BQ96M60 508 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 C11orf84Q9BUA3 381 aaPredicted RBP11.43□□□□□ -0.58
USP39-212ENST00000465514 LMAN2LQ9H0V9 348 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 TOMM22Q9NS69 142 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 HDAC6Q9UBN7 1215 aa11.43□□□□□ -0.58
USP39-212ENST00000465514 USP15Q9Y4E8 981 aaPredicted RBP11.43□□□□□ -0.58
USP39-212ENST00000465514 PLXNA4Q9HCM2 1894 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 PTPDC1A2A3K4 754 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 C5orf67F2Z3F1 127 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 NFIBO00712 420 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 FGAP02671 866 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 ICAM1P05362 532 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 ICAM3P32942 547 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
USP39-212ENST00000465514 MCMDC2Q4G0Z9 681 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 PLEKHG4Q58EX7 1191 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
USP39-212ENST00000465514 MCTP2Q6DN12 878 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 BTNL9Q6UXG8 535 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 TMEM105Q8N8V8 129 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 RIPOR3Q96MK2 946 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 PHF7Q9BWX1 381 aaPredicted RBP11.42□□□□□ -0.58
USP39-212ENST00000465514 IFIH1Q9BYX4 1025 aaKnown RBP11.42□□□□□ -0.58
USP39-212ENST00000465514 RANBP17Q9H2T7 1088 aaKnown RBP11.42□□□□□ -0.58
USP39-212ENST00000465514 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 CHD8Q9HCK8 2581 aa11.42□□□□□ -0.58
USP39-212ENST00000465514 USP24Q9UPU5 2620 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
USP39-212ENST00000465514 A0A0D9SFI3 127 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 MMP1P03956 469 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 LINC00271P0C7V0 271 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 TOP1P11387 765 aaKnown RBP11.41□□□□□ -0.58
USP39-212ENST00000465514 CALML3P27482 149 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 ZNF200P98182 395 aaPredicted RBP11.41□□□□□ -0.58
USP39-212ENST00000465514 COASYQ13057 564 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 FIBCD1Q8N539 461 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 ALG1Q9BT22 464 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 ATRXP46100 2492 aa11.41□□□□□ -0.58
USP39-212ENST00000465514 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
USP39-212ENST00000465514 RSPH10B2B2RC85 870 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 RB1P06400 928 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 RSPH10BP0C881 870 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 HSPD1P10809 573 aaKnown RBP11.4□□□□□ -0.58
USP39-212ENST00000465514 EDNRBP24530 442 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 BMPR1AP36894 532 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 PSEN2P49810 448 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 HAND2P61296 217 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 ARHGAP1Q07960 439 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 NMIQ13287 307 aaPredicted RBP11.4□□□□□ -0.58
USP39-212ENST00000465514 HDAC1Q13547 482 aaPredicted RBP11.4□□□□□ -0.58
USP39-212ENST00000465514 CHST3Q7LGC8 479 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 ADGRD2Q7Z7M1 963 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 ZBTB33Q86T24 672 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 ZNF589Q86UQ0 364 aaPredicted RBP11.4□□□□□ -0.58
USP39-212ENST00000465514 IL17RAQ96F46 866 aa11.4□□□□□ -0.58
USP39-212ENST00000465514 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
USP39-212ENST00000465514 ADGRA3Q8IWK6 1321 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 GLP2RO95838 553 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
USP39-212ENST00000465514 THPOP40225 353 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 CAMK1Q14012 370 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 HIC1Q14526 733 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 MFSD10Q14728 455 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 TICAM2Q86XR7 235 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 EFHBQ8N7U6 833 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 CLEC4DQ8WXI8 215 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 SEPT8Q92599 483 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 MPHOSPH6Q99547 160 aaKnown RBP11.39□□□□□ -0.59
USP39-212ENST00000465514 OSBPL7Q9BZF2 842 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 RWDD3Q9Y3V2 267 aa11.39□□□□□ -0.59
USP39-212ENST00000465514 OTOGLQ3ZCN5 2332 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 CCDC171Q6TFL3 1326 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 F2P00734 622 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 GH1P01241 217 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 PDHBP11177 359 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 DNAJB1P25685 340 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 NRIP1P48552 1158 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 DGKDQ16760 1214 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 LY6KQ17RY6 165 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 CCDC62Q6P9F0 684 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 MFSD6Q6ZSS7 791 aa11.38□□□□□ -0.59
USP39-212ENST00000465514 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
USP39-212ENST00000465514 CLP1Q92989 425 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms