RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 NACAP1Q9BZK3 213 aa17.59■□□□□ 0.41
HDAC6-214ENST00000465269 ECHDC1Q9NTX5 307 aa17.59■□□□□ 0.41
HDAC6-214ENST00000465269 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
HDAC6-214ENST00000465269 TPRP12270 2363 aaKnown RBP17.59■□□□□ 0.41
HDAC6-214ENST00000465269 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 HMMRO75330 724 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 GOLGA8HP0CJ92 632 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-214ENST00000465269 ID4P47928 161 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 NOVP48745 357 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 HSDL1Q3SXM5 330 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 PPTC7Q8NI37 304 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 ZFP91Q96JP5 570 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-214ENST00000465269 LMAN2LQ9H0V9 348 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 MRVI1Q9Y6F6 885 aa17.58■□□□□ 0.4
HDAC6-214ENST00000465269 ADGRA3Q8IWK6 1321 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 B4DLN1 442 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 PROB1E7EW31 1015 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 MMP1P03956 469 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 RB1P06400 928 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 PDHBP11177 359 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 NRIP1P48552 1158 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 MRPL12P52815 198 aaKnown RBP17.57■□□□□ 0.4
HDAC6-214ENST00000465269 STXBP2Q15833 593 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 EMID1Q96A84 441 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-214ENST00000465269 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 BCAS3Q9H6U6 928 aa17.57■□□□□ 0.4
HDAC6-214ENST00000465269 RC3H2Q9HBD1 1191 aaKnown RBP17.57■□□□□ 0.4
HDAC6-214ENST00000465269 C17orf102A2RUQ5 167 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 SMIM10L2AP0DMW4 78 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 SMIM10L2BP0DMW5 78 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 LAMC2Q13753 1193 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 RRP12Q5JTH9 1297 aaKnown RBP17.56■□□□□ 0.4
HDAC6-214ENST00000465269 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 ERMP1Q7Z2K6 904 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 FRMD5Q7Z6J6 570 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 C16orf70Q9BSU1 422 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 UBA5Q9GZZ9 404 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 PLAGL2Q9UPG8 496 aa17.56■□□□□ 0.4
HDAC6-214ENST00000465269 KMT2BQ9UMN6 2715 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-214ENST00000465269 WDR19Q8NEZ3 1342 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 MED19A0JLT2 244 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 GALR2O43603 387 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 KRT37O76014 449 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 ITGB1P05556 798 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 TOP1P11387 765 aaKnown RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 HOXD8P13378 290 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 COASYQ13057 564 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 BTG3Q14201 252 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 EFHBQ8N7U6 833 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 NSUN6Q8TEA1 469 aaKnown RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.42e-6■■□□□ 12.7
HDAC6-214ENST00000465269 CLP1Q92989 425 aaKnown RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 SPATA33Q96N06 139 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-214ENST00000465269 RNPEPQ9H4A4 650 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
HDAC6-214ENST00000465269 ZFHX4Q86UP3 3567 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 PER2O15055 1255 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-214ENST00000465269 ARP10275 920 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 SP2Q02086 613 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 PTPN21Q16825 1174 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 TMEM105Q8N8V8 129 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 VN1R2Q8NFZ6 395 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 SMOC2Q9H3U7 446 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
HDAC6-214ENST00000465269 MRPL42Q9Y6G3 142 aaKnown RBP17.54■□□□□ 0.4
HDAC6-214ENST00000465269 GGPS1O95749 300 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 NR3C2P08235 984 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 GHRP10912 638 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 HOXC8P31273 242 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 ICAM3P32942 547 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 NBL1P41271 181 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 ADSSL1Q8N142 457 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 SPPL3Q8TCT6 385 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 APOL5Q9BWW9 433 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 IRF2BPLQ9H1B7 796 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 CDH22Q9UJ99 828 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 TELO2Q9Y4R8 837 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 CEP250Q9BV73 2442 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 KIAA1671Q9BY89 1806 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 SPTBN2O15020 2390 aa17.53■□□□□ 0.4
HDAC6-214ENST00000465269 PPFIA3O75145 1194 aa17.52■□□□□ 0.4
HDAC6-214ENST00000465269 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
HDAC6-214ENST00000465269 EIF3JO75822 258 aaKnown RBP17.52■□□□□ 0.4
HDAC6-214ENST00000465269 MYCLP12524 364 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-214ENST00000465269 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
HDAC6-214ENST00000465269 PAN2Q504Q3 1202 aaKnown RBP17.52■□□□□ 0.4
HDAC6-214ENST00000465269 CELF3Q5SZQ8 465 aaKnown RBP17.52■□□□□ 0.4
HDAC6-214ENST00000465269 KLHL23Q8NBE8 558 aa17.52■□□□□ 0.4
HDAC6-214ENST00000465269 RGS22Q8NE09 1264 aa17.52■□□□□ 0.4
HDAC6-214ENST00000465269 IL31RAQ8NI17 732 aa17.52■□□□□ 0.4
HDAC6-214ENST00000465269 RIPOR3Q96MK2 946 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms