RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 SLC6A17Q9H1V8 727 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 HOMER2Q9NSB8 354 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 MYOTQ9UBF9 498 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 DSEQ9UL01 958 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 SRPK3Q9UPE1 567 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 ZNF652Q9Y2D9 606 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 YBX2Q9Y2T7 364 aaKnown RBP5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 PCDHB4Q9Y5E5 795 aa5.09□□□□□ -1.59
HMGXB4-205ENST00000464480 H7C1D1 291 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 BIN1O00499 593 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 NKRFO15226 690 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 PAX4O43316 350 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 EYA4O95677 639 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 AMY2AP04746 511 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 MPOP05164 745 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 COL6A2P12110 1019 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 BPIP17213 487 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 AMY2BP19961 511 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 LSSP48449 732 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 GALK1P51570 392 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 JAM2P57087 298 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 IRF9Q00978 393 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 TMEM62Q0P6H9 643 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 ZNF174Q15697 407 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 SKOR2Q2VWA4 1001 aaPredicted RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 ADGRF1Q5T601 910 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 RNF219Q5W0B1 726 aaPredicted RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 MCTP1Q6DN14 999 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 NECAB2Q7Z6G3 386 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 OSTM1Q86WC4 334 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 SPATS2Q86XZ4 545 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 PTRH1Q86Y79 214 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 SMC1BQ8NDV3 1235 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 WDR66Q8TBY9 1149 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 INTS4Q96HW7 963 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 GPR101Q96P66 508 aaPredicted RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 SMOC1Q9H4F8 434 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 SMURF1Q9HCE7 757 aa5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 DBR1Q9UK59 544 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 OAS3Q9Y6K5 1087 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-205ENST00000464480 OR14I1A6ND48 311 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 GPR39O43194 453 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 KRT37O76014 449 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 FKBP9O95302 570 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 ZBTB7AO95365 584 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 GJA4P35212 333 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 ADCYAP1R1P41586 468 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 KPNA1P52294 538 aaPredicted RBP5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 STAT4Q14765 748 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 KCTD1Q719H9 257 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 FKBP9P1Q75LS8 142 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 FERMT3Q86UX7 667 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 TRIM48Q8IWZ4 208 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 CHTF18Q8WVB6 975 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 SCYL1Q96KG9 808 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 CEP89Q96ST8 783 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 PCIF1Q9H4Z3 704 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 THG1LQ9NWX6 298 aaKnown RBP5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 DDX56Q9NY93 547 aaKnown RBP5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 ATP23Q9Y6H3 246 aa5.07□□□□□ -1.6
HMGXB4-205ENST00000464480 TCRBV5S4A2TA0A5A2 114 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 ZC3H12DA2A288 527 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 NUDT19A8MXV4 375 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 F8W031 263 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 MAN2B1O00754 1011 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 NEMP1O14524 444 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 SLC27A2O14975 620 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 CLASP2O75122 1294 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 ULK1O75385 1050 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 TADA3O75528 432 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 GLI1P08151 1106 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 ATP2A2P16615 1042 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 PDE6BP35913 854 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 TMPRSS15P98073 1019 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 SLC9A5Q14940 896 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 RAB3GAP1Q15042 981 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 KCNMB1Q16558 191 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 OLFML2BQ68BL8 750 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 CBLL1Q75N03 491 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 MILR1Q7Z6M3 343 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 ZSWIM9Q86XI8 627 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 IRF2BP1Q8IU81 584 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 PASD1Q8IV76 773 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 NOSTRINQ8IVI9 506 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 EFHBQ8N7U6 833 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 CD244Q9BZW8 370 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 OXSMQ9NWU1 459 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 ASH2LQ9UBL3 628 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 PALD1Q9ULE6 856 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 SIT1Q9Y3P8 196 aa5.06□□□□□ -1.6
HMGXB4-205ENST00000464480 SCDO00767 359 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 ABLIM1O14639 778 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 KCNK3O14649 394 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 SGSM2O43147 1006 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 RAB11FIP3O75154 756 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 PDGFRBP09619 1106 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 MAPKAPK2P49137 400 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 GUCY2FP51841 1108 aa5.05□□□□□ -1.6
HMGXB4-205ENST00000464480 KIF11P52732 1056 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms