RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 EFCAB2Q5VUJ9 269 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 ARHGAP36Q6ZRI8 547 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 CEP68Q76N32 757 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 PTRH1Q86Y79 214 aaKnown RBP4.9□□□□□ -1.63
GPNMB-205ENST00000463011 CLEC10AQ8IUN9 316 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 AMOTL1Q8IY63 956 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 KIAA1958Q8N8K9 716 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 PJA1Q8NG27 643 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 DPF3Q92784 378 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 EVI5LQ96CN4 794 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 NACC1Q96RE7 527 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 ELF4Q99607 663 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-205ENST00000463011 FAM83CQ9BQN1 747 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 SARGQ9BW04 601 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 SMURF1Q9HCE7 757 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 SAP30BPQ9UHR5 308 aaKnown RBP4.9□□□□□ -1.63
GPNMB-205ENST00000463011 FAM50BQ9Y247 325 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 SPO11Q9Y5K1 396 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 FRMPD2Q68DX3 1309 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-205ENST00000463011 CNTNAP5Q8WYK1 1306 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 FAM170BA6NMN3 283 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 H3BS24 57 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 APAF1O14727 1248 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 DHX15O43143 795 aaKnown RBP4.89□□□□□ -1.63
GPNMB-205ENST00000463011 NPHS1O60500 1241 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 AMY2AP04746 511 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 GNAT1P11488 350 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 AMY2BP19961 511 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 GTF2A2P52657 109 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 KIF11P52732 1056 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 SMAD3P84022 425 aaKnown RBP4.89□□□□□ -1.63
GPNMB-205ENST00000463011 PICALMQ13492 652 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 ADGRE1Q14246 886 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 DHX8Q14562 1220 aaKnown RBP4.89□□□□□ -1.63
GPNMB-205ENST00000463011 PDCD1Q15116 288 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 SMAD2Q15796 467 aaKnown RBP4.89□□□□□ -1.63
GPNMB-205ENST00000463011 ANGEL2Q5VTE6 544 aaKnown RBP4.89□□□□□ -1.63
GPNMB-205ENST00000463011 FSTL4Q6MZW2 842 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 RNF111Q6ZNA4 994 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 ZNF765Q7L2R6 523 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 ZAR1Q86SH2 424 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 TGFBRAP1Q8WUH2 860 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 LMBR1Q8WVP7 490 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 UBE2FQ969M7 185 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 TMEM169Q96HH4 297 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 SLC12A5Q9H2X9 1139 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 SP110Q9HB58 689 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 INVSQ9Y283 1065 aa4.89□□□□□ -1.63
GPNMB-205ENST00000463011 TCRBV5S4A2TA0A5A2 114 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 HMX2A2RU54 273 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 TRIM75PA6NK02 468 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 IFRD1O00458 451 aaPredicted RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 SCDO00767 359 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 ERC2O15083 957 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 NKRFO15226 690 aaKnown RBP eCLIP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 ASGR2P07307 311 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 VCAM1P19320 739 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 FPR2P25090 351 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 RPL10P27635 214 aaKnown RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 LTKP29376 864 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 PHC1P78364 1004 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 KRT85P78386 507 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 RBM10P98175 930 aaKnown RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 SPIRE1Q08AE8 756 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 GBX1Q14549 363 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 NKPD1Q17RQ9 610 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 LONRF3Q496Y0 759 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 IFIT1BQ5T764 474 aaKnown RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 EP400NLQ6ZTU2 488 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 ARHGAP27Q6ZUM4 889 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 PODNQ7Z5L7 613 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 NLRP10Q86W26 655 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 BEND7Q8N7W2 519 aaPredicted RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 FAM181AQ8N9Y4 354 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 TMEM52Q8NDY8 209 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 FBXO41Q8TF61 875 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 JADE3Q92613 823 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 TRMT2BQ96GJ1 504 aaKnown RBP4.88□□□□□ -1.63
GPNMB-205ENST00000463011 TEKT5Q96M29 485 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 HSPA12BQ96MM6 686 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 AIFM3Q96NN9 605 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 ZDHHC5Q9C0B5 715 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 PCIF1Q9H4Z3 704 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 PRDM16Q9HAZ2 1276 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 TAGLN3Q9UI15 199 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 DUSP13Q9UII6 198 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 INTUQ9ULD6 942 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 DAAM1Q9Y4D1 1078 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 PCDHA11Q9Y5I1 949 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 U3KQE9 123 aa4.88□□□□□ -1.63
GPNMB-205ENST00000463011 H7BY64 318 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 AP1G1O43747 822 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 KDM1AO60341 852 aa4.87□□□□□ -1.63
GPNMB-205ENST00000463011 CTNND1O60716 968 aaKnown RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 PPP1R11O60927 126 aaPredicted RBP4.87□□□□□ -1.63
GPNMB-205ENST00000463011 HIP1RO75146 1068 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms