RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TAF1DQ9H5J8 278 aaPredicted RBP17.05■□□□□ 0.32
SSR4-206ENST00000460616 BCCIPQ9P287 314 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSR4-206ENST00000460616 ATP2C2O75185 946 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 SLC1A4P43007 532 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 HLTFQ14527 1009 aaKnown RBP eCLIP17.04■□□□□ 0.32
SSR4-206ENST00000460616 TLDC1Q6P9B6 456 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 OR2W6PQ8NHA6 318 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 NDST4Q9H3R1 872 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 RAD51CO43502 376 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 PALMO75781 387 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 ZBTB7AO95365 584 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 BIRC3Q13489 604 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 CCDC178Q5BJE1 867 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 TAX1BP1Q86VP1 789 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
SSR4-206ENST00000460616 TRIM6Q9C030 488 aaPredicted RBP17.04■□□□□ 0.32
SSR4-206ENST00000460616 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 FRMD3A2A2Y4 597 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 MGRN1O60291 552 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 ASTE1Q2TB18 679 aaPredicted RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 GKAP1Q5VSY0 366 aaPredicted RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 RUFY4Q6ZNE9 571 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 ANAPC4Q9UJX5 808 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 GOLGB1Q14789 3259 aaKnown RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 MYH13Q9UKX3 1938 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 H0YGN5 161 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 FTCDO95954 541 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 RPSAP08865 295 aaKnown RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 FGFR2P21802 821 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 CTNNA1P35221 906 aaKnown RBP17.03■□□□□ 0.32
SSR4-206ENST00000460616 TNNC1P63316 161 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 KLHL7Q8IXQ5 586 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 P3H4Q92791 437 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 ISCUQ9H1K1 167 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 NFS1Q9Y697 457 aa17.03■□□□□ 0.32
SSR4-206ENST00000460616 MYH6P13533 1939 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 CHD4Q14839 1912 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 C5orf60A6NFR6 353 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 BACH1O14867 736 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 FCER1AP12319 257 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 PPP1R2P41236 205 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 PPP2R2AP63151 447 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 CPLX4Q7Z7G2 160 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 LRRC45Q96CN5 670 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
SSR4-206ENST00000460616 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.32
SSR4-206ENST00000460616 OPLAHO14841 1288 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 RTN2O75298 545 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 DDAH1O94760 285 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 SLC5A1P13866 664 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 EHHADHQ08426 723 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 ZNF844Q08AG5 666 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 BYSLQ13895 437 aaKnown RBP17.02■□□□□ 0.31
SSR4-206ENST00000460616 NAA25Q14CX7 972 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 PFKFB3Q16875 520 aaPredicted RBP17.02■□□□□ 0.31
SSR4-206ENST00000460616 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 SLC51AQ86UW1 340 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 EIF1ADQ8N9N8 165 aaKnown RBP17.02■□□□□ 0.31
SSR4-206ENST00000460616 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.31
SSR4-206ENST00000460616 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 PPP1R12BO60237 982 aaPredicted RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 CALML3P27482 149 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 ASIC1P78348 528 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 BLIDQ8IZY5 108 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 LRRC15Q8TF66 581 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 CCT6BQ92526 530 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 BAP1Q92560 729 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 TRIM9Q9C026 710 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 SNAP23O00161 211 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 DNAJC8O75937 253 aaPredicted RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 MYBP10242 640 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 UAP1Q16222 522 aaPredicted RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 TDRD12Q587J7 1177 aaKnown RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 MEI1Q5TIA1 1274 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 KIRREL3Q8IZU9 778 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 USP38Q8NB14 1042 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 TATDN2Q93075 761 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 TMEM60Q9H2L4 133 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
SSR4-206ENST00000460616 CNOT8Q9UFF9 292 aaKnown RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 PACSIN2Q9UNF0 486 aaPredicted RBP17.01■□□□□ 0.31
SSR4-206ENST00000460616 MYH10P35580 1976 aa17■□□□□ 0.31
SSR4-206ENST00000460616 CACNA1SQ13698 1873 aa17■□□□□ 0.31
SSR4-206ENST00000460616 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
SSR4-206ENST00000460616 GHRP10912 638 aa17■□□□□ 0.31
SSR4-206ENST00000460616 ERVK-9P63128 1117 aa17■□□□□ 0.31
SSR4-206ENST00000460616 ELF3P78545 371 aaPredicted RBP17■□□□□ 0.31
SSR4-206ENST00000460616 CUL1Q13616 776 aa17■□□□□ 0.31
SSR4-206ENST00000460616 NAB2Q15742 525 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms