RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 AP3B2Q13367 1082 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 LRRC8DQ7L1W4 858 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 OTOP2Q7RTS6 562 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 SERINC5Q86VE9 423 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 CCDC12Q8WUD4 166 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-228ENST00000459788 TNPO1Q92973 898 aaKnown RBP11.48□□□□□ -0.57
HDLBP-228ENST00000459788 SCLYQ96I15 445 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 GPR20Q99678 358 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-228ENST00000459788 UBIAD1Q9Y5Z9 338 aa11.48□□□□□ -0.57
HDLBP-228ENST00000459788 UNC80Q8N2C7 3258 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 CHD7Q9P2D1 2997 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 ABHD14A-ACY1A0A1B0GW23 586 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 ESYT2A0FGR8 921 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
HDLBP-228ENST00000459788 ZNF286BP0CG31 522 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 CKBP12277 381 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 FOSL2P15408 326 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 ATP2A2P16615 1042 aaKnown RBP11.47□□□□□ -0.57
HDLBP-228ENST00000459788 RXRAP19793 462 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 FGD1P98174 961 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 TRIM71Q2Q1W2 868 aaKnown RBP11.47□□□□□ -0.57
HDLBP-228ENST00000459788 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 CNKSR3Q6P9H4 555 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 BLOC1S2Q6QNY1 142 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 NIPA1Q7RTP0 329 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 HEATR3Q7Z4Q2 680 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 FAM177A1Q8N128 213 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-228ENST00000459788 PIBF1Q8WXW3 757 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 ALG1Q9BT22 464 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 LRRC2Q9BYS8 371 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 SLC28A3Q9HAS3 691 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
HDLBP-228ENST00000459788 NFASCO94856 1347 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 NRCAMQ92823 1304 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 C17orf102A2RUQ5 167 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 GOLGA8AA7E2F4 631 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 GOLGA8BA8MQT2 603 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 KIF28PB7ZC32 967 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 KCNA2P16389 499 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 METAP2P50579 478 aaKnown RBP eCLIP11.46□□□□□ -0.571e-8■■□□□ 14.4
HDLBP-228ENST00000459788 ADCY7P51828 1080 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 NAPAP54920 295 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 COL9A3Q14050 684 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 WWC2Q6AWC2 1192 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 RPAINQ86UA6 219 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 CMTR1Q8N1G2 835 aaKnown RBP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 MAFAQ8NHW3 353 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 FAM161BQ96MY7 647 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 GAS2L1Q99501 681 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 TM6SF1Q9BZW5 370 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 FTOQ9C0B1 505 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 JADE2Q9NQC1 790 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-228ENST00000459788 PCDHA6Q9UN73 950 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 PCDHA8Q9Y5H6 950 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 SNX14Q9Y5W7 946 aa11.46□□□□□ -0.57
HDLBP-228ENST00000459788 LOXHD1Q8IVV2 1947 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 TTC28Q96AY4 2481 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 SIP14410 1827 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 ZBBXA8MT70 800 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 STXBP3O00186 592 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 PRPF3O43395 683 aaKnown RBP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 SMIM10L2AP0DMW4 78 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 SMIM10L2BP0DMW5 78 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 ITGB5P18084 799 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 POU3F3P20264 500 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 RPS6KB1P23443 525 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 SREBF1P36956 1147 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 KCNJ6P48051 423 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 CLK2P49760 499 aaKnown RBP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 ADAM17P78536 824 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 MTMR1Q13613 665 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 GRIN2CQ14957 1233 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 PFKFB3Q16875 520 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 Q6ZUG5 572 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 MYLIPQ8WY64 445 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 SEPT1Q8WYJ6 367 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 GPKOWQ92917 476 aaPredicted RBP eCLIP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 JAKMIP1Q96N16 626 aaKnown RBP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 MXRA8Q9BRK3 442 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 RTEL1Q9NZ71 1219 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
HDLBP-228ENST00000459788 PRUNE2Q8WUY3 3088 aa11.45□□□□□ -0.58
HDLBP-228ENST00000459788 COL4A6Q14031 1691 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 EVPLQ92817 2033 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 SMCO2A6NFE2 343 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 GRXCR1A8MXD5 290 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 CYP3A4P08684 503 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 SCG2P13521 617 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 GNA11P29992 359 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 CDC27P30260 824 aa11.44□□□□□ -0.58
HDLBP-228ENST00000459788 PBX2P40425 430 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms