RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TMEM221A6NGB7 291 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 M0R296 226 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 GRM6O15303 877 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 LINC01565O15544 149 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CTSHP09668 335 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 HOXD8P13378 290 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SMAD4Q13485 552 aaKnown RBP13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 LAMC2Q13753 1193 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 BMP8AQ7Z5Y6 402 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 SEPT8Q92599 483 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 RMDN3Q96TC7 470 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 FAM86C1Q9NVL1 165 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 MYO7AQ13402 2215 aa13.16□□□□□ -0.3
PRAMEF35P-201ENST00000458709 KIAA1217Q5T5P2 1943 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CFAP54Q96N23 3096 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 STXBP3O00186 592 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 NCK2O43639 380 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 GSPT1P15170 499 aaKnown RBP13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 HSDL1Q3SXM5 330 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TRIM67Q6ZTA4 783 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 PBXIP1Q96AQ6 731 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 EVI5LQ96CN4 794 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 IWS1Q96ST2 819 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
PRAMEF35P-201ENST00000458709 ABCB11O95342 1321 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 RALGAPA2Q2PPJ7 1873 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 C17orf102A2RUQ5 167 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 C5orf67F2Z3F1 127 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 GFRA3O60609 400 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 RGS20O76081 388 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 NR3C2P08235 984 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 HOXC8P31273 242 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SUGP1Q8IWZ8 645 aaKnown RBP13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ATP6V0A1Q93050 837 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 C16orf70Q9BSU1 422 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ALG13Q9NP73 1137 aaKnown RBP13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
PRAMEF35P-201ENST00000458709 TREHO43280 583 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 GGPS1O95749 300 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SMIM10L2AP0DMW4 78 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SMIM10L2BP0DMW5 78 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 BMPR1AP36894 532 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
PRAMEF35P-201ENST00000458709 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 PPFIA4O75335 1185 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 RB1P06400 928 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 UBA1P22314 1058 aaKnown RBP13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 NDUFV1P49821 464 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 HAND2P61296 217 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ZXDAP98168 799 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ALX1Q15699 326 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 QRICH1Q2TAL8 776 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 PRRX2Q99811 253 aa13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
PRAMEF35P-201ENST00000458709 H3BRB1 525 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CFBP00751 764 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 FGAP02671 866 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MMP1P03956 469 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SDSP20132 328 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 SP2Q02086 613 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ADAM15Q13444 863 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CAMK1Q14012 370 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ADGRD2Q7Z7M1 963 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 APBB2Q92870 758 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 TTC14Q96N46 770 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 ZKSCAN3Q9BRR0 538 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 MAF1Q9H063 256 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 TUT1Q9H6E5 874 aaKnown RBP13.11□□□□□ -0.31
PRAMEF35P-201ENST00000458709 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 OPLAHO14841 1288 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 CAND2O75155 1236 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 EYA4O95677 639 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 LGALS2P05162 132 aa13.1□□□□□ -0.31
PRAMEF35P-201ENST00000458709 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms