RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 E4F1Q66K89 784 aaPredicted RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 THOC7Q6I9Y2 204 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 OLFML1Q6UWY5 402 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TUBA1AQ71U36 451 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 MAATS1Q7Z4T9 603 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TMEM110Q86TL2 294 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ITPRIPQ8IWB1 547 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC83Q8IWF9 413 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 FUKQ8N0W3 1084 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ZGPATQ8N5A5 531 aaKnown RBP6.19□□□□□ -1.42
HMGB4-202ENST00000458277 FLCNQ8NFG4 579 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 MORC4Q8TE76 937 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TRPC4APQ8TEL6 797 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 NSMCE1Q8WV22 266 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 BPIFA3Q9BQP9 254 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CORO1BQ9BR76 489 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 YIPF3Q9GZM5 350 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 SIL1Q9H173 461 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TAOK3Q9H2K8 898 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 GOLPH3LQ9H4A5 285 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 CLSTN2Q9H4D0 955 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ZBTB40Q9NUA8 1239 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 MYO1AQ9UBC5 1043 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 TPCN1Q9ULQ1 816 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 RABL2BQ9UNT1 228 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 SATB2Q9UPW6 733 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 USP20Q9Y2K6 914 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 SH3GLB1Q9Y371 365 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 IKBKGQ9Y6K9 419 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 PLA2R1Q13018 1463 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 ITSN2Q9NZM3 1697 aa6.19□□□□□ -1.42
HMGB4-202ENST00000458277 PREX2Q70Z35 1606 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CTAGE15A4D2H0 777 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 PALM3A6NDB9 673 aaPredicted RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 M0R2C6 588 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 M0R2N6 131 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 STX6O43752 255 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 MGEA5O60502 916 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 PFDN1O60925 122 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 GADD45BO75293 160 aaPredicted RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 FARP2O94887 1054 aaPredicted RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 F13A1P00488 732 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 F13BP05160 661 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CTAGE8P0CG41 777 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CPA3P15088 417 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 PPP2R1AP30153 589 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CTCFP49711 727 aaPredicted RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 SERPINB8P50452 374 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CCT8P50990 548 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 ATP1A2P50993 1020 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 NEK4P51957 841 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 PDE1BQ01064 536 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 KIF5AQ12840 1032 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 SEPT6Q14141 434 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 RCN1Q15293 331 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CFAP157Q5JU67 520 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 ZFYVE27Q5T4F4 411 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 EFCAB2Q5VUJ9 269 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 FAAH2Q6GMR7 532 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CTAGE6Q86UF2 777 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CCAR1Q8IX12 1150 aaKnown RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CTAGE4Q8IX94 777 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 RASSF8Q8NHQ8 419 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 UBASH3BQ8TF42 649 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 IFT81Q8WYA0 676 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 ATP6V0A1Q93050 837 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 LRRC45Q96CN5 670 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 NAF1Q96HR8 494 aaKnown RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 ZSCAN31Q96LW9 406 aaPredicted RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CGREF1Q99674 301 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 LACRTQ9GZZ8 138 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 EPN3Q9H201 632 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 TBCCD1Q9NVR7 557 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 TUBGCP4Q9UGJ1 667 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 NRBP1Q9UHY1 535 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CDC23Q9UJX2 597 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 MTMR7Q9Y216 660 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 CARD8Q9Y2G2 431 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 TTLL3Q9Y4R7 772 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
HMGB4-202ENST00000458277 MSH6P52701 1360 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 KIF24Q5T7B8 1368 aa6.18□□□□□ -1.42
HMGB4-202ENST00000458277 ABCC5O15440 1437 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 PTPRKQ15262 1439 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 FAM135BQ49AJ0 1406 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 CD109Q6YHK3 1445 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 YTHDC2Q9H6S0 1430 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 DENND4BO75064 1496 aaPredicted RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 GPR75-ASB3A0A0A6YYF3 556 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 USP27XA6NNY8 438 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 BIN1O00499 593 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 PRPF3O43395 683 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 SH3BP5O60239 455 aa6.17□□□□□ -1.42
HMGB4-202ENST00000458277 USO1O60763 962 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 TBCAO75347 108 aaKnown RBP6.17□□□□□ -1.42
HMGB4-202ENST00000458277 WDHD1O75717 1129 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms