RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 GIMAP8Q8ND71 665 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-215ENST00000457039 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 MLXIPQ9HAP2 919 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 TELO2Q9Y4R8 837 aa16.05■□□□□ 0.16
SMPD4-215ENST00000457039 A0A1W2PQ45 241 aaPredicted RBP16.04■□□□□ 0.16
SMPD4-215ENST00000457039 A0A1W2PQY0 241 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 H3BQV1 296 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 MSH4O15457 936 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 SLC37A4O43826 429 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 ZEB2O60315 1214 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 SORBS3O60504 671 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 GCFC2P16383 781 aaKnown RBP16.04■□□□□ 0.16
SMPD4-215ENST00000457039 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 SPATA33Q96N06 139 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 DNAH12Q6ZR08 3092 aa16.04■□□□□ 0.16
SMPD4-215ENST00000457039 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 IPO5O00410 1097 aaKnown RBP16.03■□□□□ 0.16
SMPD4-215ENST00000457039 PDCP20941 246 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 SYT1P21579 422 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 PURAQ00577 322 aaKnown RBP16.03■□□□□ 0.16
SMPD4-215ENST00000457039 BRDTQ58F21 947 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-215ENST00000457039 ETNPPLQ8TBG4 499 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 GPR20Q99678 358 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 NAP1L4Q99733 375 aaKnown RBP16.03■□□□□ 0.16
SMPD4-215ENST00000457039 ZNF577Q9BSK1 485 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-215ENST00000457039 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
SMPD4-215ENST00000457039 DDX25Q9UHL0 483 aaKnown RBP16.03■□□□□ 0.16
SMPD4-215ENST00000457039 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.16
SMPD4-215ENST00000457039 KPNA6O60684 536 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 PPFIA4O75335 1185 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 CABYRO75952 493 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 SNX17Q15036 470 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 DGKDQ16760 1214 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 CXCL17Q6UXB2 119 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 SLC5A5Q92911 643 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 FERMT2Q96AC1 680 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 SDF4Q9BRK5 362 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.16
SMPD4-215ENST00000457039 KCNMB3Q9NPA1 279 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 SLC9A2Q9UBY0 812 aa16.02■□□□□ 0.16
SMPD4-215ENST00000457039 ELP1O95163 1332 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 GSTTP1A0A1W2PQM5 241 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 CCNE2O96020 404 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 MYL3P08590 195 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-215ENST00000457039 GNL2Q13823 731 aaKnown RBP16.01■□□□□ 0.15
SMPD4-215ENST00000457039 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 MCTP1Q6DN14 999 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 KAT2BQ92831 832 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 UIMC1Q96RL1 719 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 RIT2Q99578 217 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 MTG1Q9BT17 334 aaPredicted RBP16.01■□□□□ 0.15
SMPD4-215ENST00000457039 STARD7Q9NQZ5 370 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 TBC1D22BQ9NU19 505 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 MTMR6Q9Y217 621 aa16.01■□□□□ 0.15
SMPD4-215ENST00000457039 SCN10AQ9Y5Y9 1956 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 GRIN2DO15399 1336 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 VPS37CA5D8V6 355 aaPredicted RBP16■□□□□ 0.15
SMPD4-215ENST00000457039 NOP56O00567 594 aaKnown RBP16■□□□□ 0.15
SMPD4-215ENST00000457039 TBX3O15119 743 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 PSMD10O75832 226 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 ATG7O95352 703 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 F2P00734 622 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 SLC39A5Q6ZMH5 540 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 POTEDQ86YR6 584 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 SLC43A3Q8NBI5 491 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 HAS1Q92839 578 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 GJA10Q969M2 543 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 C16orf70Q9BSU1 422 aa16■□□□□ 0.15
SMPD4-215ENST00000457039 HAS3O00219 553 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 STX6O43752 255 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 LGALS2P05162 132 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 HSP90AA1P07900 732 aaKnown RBP15.99■□□□□ 0.15
SMPD4-215ENST00000457039 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-215ENST00000457039 ACTR2P61160 394 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 SP4Q02446 784 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 ORC2Q13416 577 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-215ENST00000457039 BECN1Q14457 450 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 LRRC26Q2I0M4 334 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 LRCH2Q5VUJ6 765 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 ZNF746Q6NUN9 644 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-215ENST00000457039 FAM20AQ96MK3 541 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 MTMR9Q96QG7 549 aa15.99■□□□□ 0.15
SMPD4-215ENST00000457039 NOL7Q9UMY1 257 aaKnown RBP15.99■□□□□ 0.15
SMPD4-215ENST00000457039 IGKV6D-21A0A0A0MT36 114 aa15.98■□□□□ 0.15
SMPD4-215ENST00000457039 A0A0U1RQG5 324 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-215ENST00000457039 DDX39AO00148 427 aaKnown RBP15.98■□□□□ 0.15
SMPD4-215ENST00000457039 NEMFO60524 1076 aa15.98■□□□□ 0.15
SMPD4-215ENST00000457039 LGR5O75473 907 aa15.98■□□□□ 0.15
SMPD4-215ENST00000457039 ZNF286BP0CG31 522 aa15.98■□□□□ 0.15
SMPD4-215ENST00000457039 ATP2B1P20020 1258 aa15.98■□□□□ 0.15
SMPD4-215ENST00000457039 TCF7P36402 384 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms