RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DHTKD1Q96HY7 919 aaPredicted RBP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EPSTI1Q96J88 318 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MS4A4AQ96JQ5 239 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 RNF14Q9UBS8 474 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GGA2Q9UJY4 613 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GUCA1BQ9UMX6 200 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ATRNL1Q5VV63 1379 aa11.12□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ABCB11O95342 1321 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TTC26A0AVF1 554 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 BICDL2A1A5D9 508 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GPR25O00155 361 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PSMA7O14818 248 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EIF3HO15372 352 aaKnown RBP eCLIP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TBC1D12O60347 775 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 USO1O60763 962 aaKnown RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TACC1O75410 805 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ATP1A1P05023 1023 aaKnown RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 FGRP09769 529 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CYP7A1P22680 504 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CALML3P27482 149 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 HNRNPH3P31942 346 aaKnown RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 IRAK1P51617 712 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PPIL2Q13356 520 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DGKZQ13574 1117 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CCL15Q16663 113 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 NOL9Q5SY16 702 aaKnown RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CERS3Q8IU89 383 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CCDC47Q96A33 483 aaKnown RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MYCBPQ99417 103 aaPredicted RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PTPN18Q99952 460 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 VPS16Q9H269 839 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 A1CFQ9NQ94 594 aaKnown RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SH3GLB2Q9NR46 395 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TACC3Q9Y6A5 838 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ATAD5Q96QE3 1844 aa11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 COL2A1P02458 1487 aaPredicted RBP11.11□□□□□ -0.63
CHCHD4P3-201ENST00000455954 AGPSO00116 658 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 LAD1O00515 517 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 IRF6O14896 467 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CTNND1O60716 968 aaKnown RBP11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CAPN15O75808 1086 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ERLIN2O94905 339 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 RHOBTB3O94955 611 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 LCA5LO95447 670 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CETPP11597 493 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GGCXP38435 758 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PPARAQ07869 468 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 KIF5AQ12840 1032 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 WDR59Q6PJI9 974 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 FOXR2Q6PJQ5 311 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TMTC3Q6ZXV5 915 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 YTHDF3Q7Z739 585 aaKnown RBP11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 IRF2BP1Q8IU81 584 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CD302Q8IX05 232 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ZNF296Q8WUU4 475 aaPredicted RBP11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 BRI3BPQ8WY22 251 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SECISBP2LQ93073 1101 aaKnown RBP11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ABHD8Q96I13 439 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ERGIC2Q96RQ1 377 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CHP1Q99653 195 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CAPS2Q9BXY5 557 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MCOLN1Q9GZU1 580 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 R3HDMLQ9H3Y0 253 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 ARMT1Q9H993 441 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EXOC1Q9NV70 894 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SLC4A4Q9Y6R1 1079 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
CHCHD4P3-201ENST00000455954 TNKSO95271 1327 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 FKTNO75072 461 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PHACTR2O75167 634 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PTGDRQ13258 359 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 DRP2Q13474 957 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 PLCB4Q15147 1175 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 NPY5RQ15761 445 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 SMYD4Q8IYR2 804 aaPredicted RBP11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 CNPY4Q8N129 248 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 MREGQ8N565 214 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 C3orf20Q8ND61 904 aa11.09□□□□□ -0.63
CHCHD4P3-201ENST00000455954 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms