RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 STAT6P42226 847 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 COPS6Q7L5N1 327 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 CSGALNACT2Q8N6G5 542 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 ANKRD27Q96NW4 1050 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 SNX3O60493 162 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 HNRNPH3P31942 346 aaKnown RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 RNASELQ05823 741 aaKnown RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 LRRC24Q50LG9 513 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 TTI2Q6NXR4 508 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 PI16Q6UXB8 463 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 ASRGL1Q7L266 308 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 CNOT6LQ96LI5 555 aaKnown RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 DUSP9Q99956 384 aaKnown RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 NOC4LQ9BVI4 516 aaKnown RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 AP1M1Q9BXS5 423 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
PTPA-223ENST00000452489 TMEM59LQ9UK28 342 aa20.4■□□□□ 0.86
PTPA-223ENST00000452489 PXDNQ92626 1479 aa20.39■□□□□ 0.86
PTPA-223ENST00000452489 MTIF2P46199 727 aaKnown RBP20.39■□□□□ 0.85
PTPA-223ENST00000452489 KLC1Q07866 573 aa20.39■□□□□ 0.85
PTPA-223ENST00000452489 SCARF1Q14162 830 aa20.39■□□□□ 0.85
PTPA-223ENST00000452489 MYBPC3Q14896 1274 aa20.39■□□□□ 0.85
PTPA-223ENST00000452489 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
PTPA-223ENST00000452489 UCMAQ8WVF2 138 aa20.39■□□□□ 0.85
PTPA-223ENST00000452489 MMTAG2Q9BU76 263 aaKnown RBP20.39■□□□□ 0.85
PTPA-223ENST00000452489 SUDS3Q9H7L9 328 aaPredicted RBP20.39■□□□□ 0.85
PTPA-223ENST00000452489 IQSEC3Q9UPP2 1182 aaPredicted RBP20.39■□□□□ 0.85
PTPA-223ENST00000452489 SMIM23A6NLE4 172 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 LRRC53A6NM62 1247 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 TCIRG1Q13488 830 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 OR52E8Q6IFG1 317 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 EIF1ADQ8N9N8 165 aaKnown RBP20.38■□□□□ 0.85
PTPA-223ENST00000452489 GOPCQ9HD26 462 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 INTS9Q9NV88 658 aaKnown RBP20.38■□□□□ 0.85
PTPA-223ENST00000452489 DEXIO95424 95 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 ABCD1P33897 745 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 MMP13P45452 471 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 NLRP6P59044 892 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 PTGDRQ13258 359 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 RRAGAQ7L523 313 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 FBF1Q8TES7 1133 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 FGD4Q96M96 766 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 DDX47Q9H0S4 455 aaKnown RBP20.38■□□□□ 0.85
PTPA-223ENST00000452489 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
PTPA-223ENST00000452489 A0A087WZG4 1122 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 CREB3O43889 395 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 RTN1Q16799 776 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 CCDC178Q5BJE1 867 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 MEI1Q5TIA1 1274 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 APLFQ8IW19 511 aaPredicted RBP20.37■□□□□ 0.85
PTPA-223ENST00000452489 STAG2Q8N3U4 1231 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 UTP4Q969X6 686 aaKnown RBP20.37■□□□□ 0.85
PTPA-223ENST00000452489 IFT43Q96FT9 208 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 ZNF594Q96JF6 807 aaPredicted RBP20.37■□□□□ 0.85
PTPA-223ENST00000452489 KRT23Q9C075 422 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 ATP8A1Q9Y2Q0 1164 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 PLEKHG1Q9ULL1 1385 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 PTPROQ16827 1216 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 FIGNQ5HY92 759 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 CRACR2BQ8N4Y2 399 aaPredicted RBP20.37■□□□□ 0.85
PTPA-223ENST00000452489 RNF10Q8N5U6 811 aaKnown RBP20.37■□□□□ 0.85
PTPA-223ENST00000452489 IFT74Q96LB3 600 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 ZKSCAN3Q9BRR0 538 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
PTPA-223ENST00000452489 hCG_1642624A0A1W2PR95 340 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 TLDC2A0PJX2 215 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 OAS1P00973 400 aaKnown RBP20.36■□□□□ 0.85
PTPA-223ENST00000452489 MAGEA10P43363 369 aaPredicted RBP20.36■□□□□ 0.85
PTPA-223ENST00000452489 PEX5P50542 639 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 IFI35P80217 286 aaPredicted RBP20.36■□□□□ 0.85
PTPA-223ENST00000452489 KIAA0825Q8IV33 1275 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 ERGIC2Q96RQ1 377 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 RNPEPL1Q9HAU8 725 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 USP15Q9Y4E8 981 aaPredicted RBP20.36■□□□□ 0.85
PTPA-223ENST00000452489 ROBO2Q9HCK4 1378 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 PSMA7O14818 248 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 FLOT1O75955 427 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 ZFYP08048 801 aaPredicted RBP20.36■□□□□ 0.85
PTPA-223ENST00000452489 ADORA1P30542 326 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 GBP1P32455 592 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 IL17AQ16552 155 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 SDCCAG8Q86SQ7 713 aaPredicted RBP20.36■□□□□ 0.85
PTPA-223ENST00000452489 FITM2Q8N6M3 262 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPA-223ENST00000452489 ZSWIM5Q9P217 1185 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 MYH2Q9UKX2 1941 aa20.36■□□□□ 0.85
PTPA-223ENST00000452489 KCNK3O14649 394 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 PRDM1O75626 825 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 CALB2P22676 271 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 KLRC1P26715 233 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 ZAP70P43403 619 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 DYNC1I2Q13409 638 aaKnown RBP20.35■□□□□ 0.85
PTPA-223ENST00000452489 GIGYF2Q6Y7W6 1299 aaKnown RBP20.35■□□□□ 0.85
PTPA-223ENST00000452489 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
PTPA-223ENST00000452489 NSRP1Q9H0G5 558 aaKnown RBP20.35■□□□□ 0.85
PTPA-223ENST00000452489 DPH5Q9H2P9 285 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 PEX11AO75192 247 aa20.35■□□□□ 0.85
PTPA-223ENST00000452489 WFS1O76024 890 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms