RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CDR2LQ86X02 465 aaPredicted RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 CCDC125Q86Z20 511 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 IQCF2Q8IXL9 164 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 INPP5DQ92835 1189 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CNKSR1Q969H4 720 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 CCDC124Q96CT7 223 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 ITPKCQ96DU7 683 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 IL17RAQ96F46 866 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MFRPQ9BY79 579 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 PRDM16Q9HAZ2 1276 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 GIMAP4Q9NUV9 329 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 POLR3EQ9NVU0 708 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 MCM9Q9NXL9 1143 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 HDAC6Q9UBN7 1215 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ZNF212Q9UDV6 495 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ZFP69BQ9UJL9 534 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 INTUQ9ULD6 942 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 G3BP2Q9UN86 482 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 CTNND2Q9UQB3 1225 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 HBS1LQ9Y450 684 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 RBM8AQ9Y5S9 174 aaKnown RBP2.39□□□□□ -2.03
USP53-202ENST00000450251 LRRIQ1Q96JM4 1722 aa2.39□□□□□ -2.03
USP53-202ENST00000450251 ARHGAP5Q13017 1502 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PTPDC1A2A3K4 754 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 WDR91A4D1P6 747 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 B4DLN1 442 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 H7C1D1 291 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PGRMC1O00264 195 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 ORC4O43929 436 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CCDC22O60826 627 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 BAG2O95816 211 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ATP6V1C1P21283 382 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MARK3P27448 753 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SMARCA1P28370 1054 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SERPINB6P35237 376 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 IARSP41252 1262 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 STAT6P42226 847 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RECQLP46063 649 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 DLG4P78352 724 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DNAJC3Q13217 504 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 BLMHQ13867 455 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TTF1Q15361 905 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 CREB3L3Q68CJ9 461 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MTHFD1LQ6UB35 978 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 UNC13DQ70J99 1090 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 USP37Q86T82 979 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CD302Q8IX05 232 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SRRM1Q8IYB3 904 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 ATP8B4Q8TF62 1192 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PRPF31Q8WWY3 499 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 CMTM5Q96DZ9 223 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CEP19Q96LK0 163 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TTC25Q96NG3 672 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TUBGCP5Q96RT8 1024 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CCT7Q99832 543 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CNPY3Q9BT09 278 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 FAM167BQ9BTA0 163 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RBM42Q9BTD8 480 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 PLEKHA4Q9H4M7 779 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 IL1RAPL2Q9NP60 686 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TCP11L1Q9NUJ3 509 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 STMN3Q9NZ72 180 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DLGAP2Q9P1A6 1054 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KCNH3Q9ULD8 1083 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MKL2Q9ULH7 1088 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CHMP2BQ9UQN3 213 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PRELID1Q9Y255 219 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CAB39Q9Y376 341 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 C2CD2Q9Y426 696 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 EPN1Q9Y6I3 576 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 MAP3K15Q6ZN16 1313 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PRR23AA6NEV1 266 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PSMD14O00487 310 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TTI1O43156 1089 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 DTNBO60941 627 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 FKBP6O75344 327 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 TRIM16O95361 564 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 RAPGEF3O95398 923 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 LONP1P36776 959 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 METAP2P50579 478 aaKnown RBP eCLIP2.38□□□□□ -2.03
USP53-202ENST00000450251 PMS2P54278 862 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ADCY1Q08828 1119 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 PDAP1Q13442 181 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 C15orf59Q2T9L4 293 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 TRIM16LQ309B1 348 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ZCWPW2Q504Y3 356 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ATG16L1Q676U5 607 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 KRT39Q6A163 491 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 MIS18BP1Q6P0N0 1132 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SHQ1Q6PI26 577 aaKnown RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 NCAPG2Q86XI2 1143 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ATL2Q8NHH9 583 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 EME1Q96AY2 570 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 SDCCAG3Q96C92 435 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 GPR101Q96P66 508 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 ROPN1BQ9BZX4 212 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 BRD8Q9H0E9 1235 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 CCDC134Q9H6E4 229 aa2.38□□□□□ -2.03
USP53-202ENST00000450251 ROPN1Q9HAT0 212 aaPredicted RBP2.38□□□□□ -2.03
USP53-202ENST00000450251 EHD2Q9NZN4 543 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms