RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 HERC4Q5GLZ8 1057 aaPredicted RBP12.48□□□□□ -0.41
SYVN1-204ENST00000449943 FAM133AQ8N9E0 248 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 MTMR4Q9NYA4 1195 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 MAST2Q6P0Q8 1798 aa12.48□□□□□ -0.41
SYVN1-204ENST00000449943 EDIL3O43854 480 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 GNGT1P63211 74 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 CFAP221Q4G0U5 840 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 ADGRF4Q8IZF3 695 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 FLAD1Q8NFF5 587 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 PCDHA12Q9UN75 941 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 ESYT2A0FGR8 921 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 FAM170AA1A519 330 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 EPHB4P54760 987 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 GUCY2DQ02846 1103 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 EHHADHQ08426 723 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 TNIP1Q15025 636 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 DNAAF5Q86Y56 855 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 ARL8AQ96BM9 186 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 POTECB2RU33 542 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 GTF2IP78347 998 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 HGSNATQ68CP4 663 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 GPBP1Q86WP2 473 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 TBC1D22AQ8WUA7 517 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 PACSIN1Q9BY11 444 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 LRRC27Q9C0I9 530 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 EHMT1Q9H9B1 1298 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 EPB41L5Q9HCM4 733 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 TLR2O60603 784 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 HEXIM1O94992 359 aaKnown RBP12.47□□□□□ -0.41
SYVN1-204ENST00000449943 STAT3P40763 770 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 ATP1A2P50993 1020 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 SH2D3CQ8N5H7 860 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 KRT12Q99456 494 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
SYVN1-204ENST00000449943 JMJD4Q9H9V9 463 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
SYVN1-204ENST00000449943 LCA5LO95447 670 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 CARSP49589 748 aaKnown RBP12.46□□□□□ -0.41
SYVN1-204ENST00000449943 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 LUC7LQ9NQ29 371 aaKnown RBP12.46□□□□□ -0.41
SYVN1-204ENST00000449943 CEP72Q9P209 647 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 NAV1Q8NEY1 1877 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 KLRC1P26715 233 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 IRAK1P51617 712 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 PDIA5Q14554 519 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 KIAA0753Q2KHM9 967 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 KLHL7Q8IXQ5 586 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 HAS1Q92839 578 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 DNAJC19Q96DA6 116 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 MYH1P12882 1939 aa12.46□□□□□ -0.41
SYVN1-204ENST00000449943 OPA1O60313 960 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 APBA3O96018 575 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 SERPING1P05155 500 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 GLI1P08151 1106 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 PRLRP16471 622 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.42
SYVN1-204ENST00000449943 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 GOLPH3Q9H4A6 298 aa12.46□□□□□ -0.42
SYVN1-204ENST00000449943 NOL4O94818 638 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 PSMD2Q13200 908 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 ASTE1Q2TB18 679 aaPredicted RBP12.45□□□□□ -0.42
SYVN1-204ENST00000449943 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
SYVN1-204ENST00000449943 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 KRT14P02533 472 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 FAM153BP0C7A2 387 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 PLA2G4BP0C869 781 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 ACTN1P12814 892 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 FAM153CQ494X1 144 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 CCDC65Q8IXS2 484 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 FAM153AQ9UHL3 310 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 DAGLAQ9Y4D2 1042 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
SYVN1-204ENST00000449943 A0A087X0T9 212 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 SSU72P8A0A1W2PR75 194 aa12.45□□□□□ -0.42
SYVN1-204ENST00000449943 GOLGA8KD6RF30 607 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms