RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 RAD17O75943 681 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 ATF2P15336 505 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 GBP1P32455 592 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 CACNB3P54284 484 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 LLGL1Q15334 1064 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 CCDC62Q6P9F0 684 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
CTC1-202ENST00000449476 TMEM206Q9H813 350 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 NRBP2Q9NSY0 501 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 SCYL2Q6P3W7 929 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 PPP4R3CPQ6ZMV5 832 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
CTC1-202ENST00000449476 NOD1Q9Y239 953 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
CTC1-202ENST00000449476 A0A1B0GUA9 196 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 I3L4J1 428 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 PLTPP55058 493 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 SNAP25P60880 206 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 GRM4Q14833 912 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 CCDC13Q8IYE1 715 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 RUNDC3BQ96NL0 473 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 KMT5AQ9NQR1 393 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 ZBTB5O15062 677 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 PCK1P35558 622 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 MXI1P50539 228 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 SLC7A5Q01650 507 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 BFSP1Q12934 665 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 BSPRYQ5W0U4 402 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 KAZNQ674X7 775 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 SPATS2Q86XZ4 545 aaKnown RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 RAB3IL1Q8TBN0 382 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 KLHL14Q9P2G3 628 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 ATP8A1Q9Y2Q0 1164 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 ADGRG1Q9Y653 693 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 PVALEFA0A1B0GWK0 134 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 RNF8O76064 485 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 NPR1P16066 1061 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 EXOC4Q96A65 974 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 PBKQ96KB5 322 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 UBE2TQ9NPD8 197 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 ORC4O43929 436 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 STAM2O75886 525 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 GH2P01242 217 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 ATP2C1P98194 919 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 TAF12Q16514 161 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 INO80Q9ULG1 1556 aaPredicted RBP11.32□□□□□ -0.6
CTC1-202ENST00000449476 UTYO14607 1347 aa11.32□□□□□ -0.6
CTC1-202ENST00000449476 SFI1A8K8P3 1242 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 TMOD1P28289 359 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 MAPK4P31152 587 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 BBOF1Q8ND07 529 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 DPF2Q92785 391 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 TTC26A0AVF1 554 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 CSF1RP07333 972 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 PHBP35232 272 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 IFNAR2P48551 515 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 PDIA6Q15084 440 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 PPP2R5AQ15172 486 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 ADPGKQ9BRR6 497 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 PCDHB4Q9Y5E5 795 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 TROVE2P10155 538 aaKnown RBP eCLIP11.31□□□□□ -0.6
CTC1-202ENST00000449476 KRT81Q14533 505 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 GEN1Q17RS7 908 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 TAB3Q8N5C8 712 aaPredicted RBP11.31□□□□□ -0.6
CTC1-202ENST00000449476 TMEM260Q9NX78 707 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 MROH7-TTC4A0A0A0MT08 1334 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms