RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 HOMER2Q9NSB8 354 aa19.74■□□□□ 0.75
LMNA-208ENST00000448611 RLFQ13129 1914 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 N4BP3O15049 544 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 ARP10275 920 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 ARSHQ5FYA8 562 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 DNTTIP2Q5QJE6 756 aaKnown RBP19.73■□□□□ 0.75
LMNA-208ENST00000448611 SLC30A10Q6XR72 485 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 TC2NQ8N9U0 490 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 REPS2Q8NFH8 660 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 ZFP91Q96JP5 570 aaPredicted RBP19.73■□□□□ 0.75
LMNA-208ENST00000448611 HSD17B14Q9BPX1 270 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 PANK4Q9NVE7 773 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 ADAMTS5Q9UNA0 930 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 DNM3Q9UQ16 869 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 AFG3L2Q9Y4W6 797 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 FRMPD4Q14CM0 1322 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 ITIH6Q6UXX5 1313 aa19.73■□□□□ 0.75
LMNA-208ENST00000448611 POLR2AP24928 1970 aaKnown RBP19.72■□□□□ 0.75
LMNA-208ENST00000448611 NRDCO43847 1150 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 ITGB5P18084 799 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 TMEM139Q8IV31 216 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 KCTD17Q8N5Z5 321 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 SYT2Q8N9I0 419 aaPredicted RBP19.72■□□□□ 0.75
LMNA-208ENST00000448611 ZNF526Q8TF50 670 aaPredicted RBP19.72■□□□□ 0.75
LMNA-208ENST00000448611 ZNF577Q9BSK1 485 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 VPS16Q9H269 839 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 CTDP1Q9Y5B0 961 aaPredicted RBP19.72■□□□□ 0.75
LMNA-208ENST00000448611 RBBP6Q7Z6E9 1792 aaKnown RBP19.72■□□□□ 0.75
LMNA-208ENST00000448611 FRMD3A2A2Y4 597 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 USP27XA6NNY8 438 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 BCRP11274 1271 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 DSG3P32926 999 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 CYP4A11Q02928 519 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 B3GNT9Q6UX72 402 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 DLK2Q6UY11 383 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 CCAR2Q8N163 923 aaKnown RBP19.72■□□□□ 0.75
LMNA-208ENST00000448611 IL31RAQ8NI17 732 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 TRERF1Q96PN7 1200 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 PCDHA2Q9Y5H9 948 aa19.72■□□□□ 0.75
LMNA-208ENST00000448611 NPHP3-ACAD11A0A0J9YXS1 232 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 GAS7O60861 476 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 RPS6P62753 249 aaKnown RBP19.71■□□□□ 0.75
LMNA-208ENST00000448611 PRKG1Q13976 671 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 PCNX4Q63HM2 1172 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 E4F1Q66K89 784 aaPredicted RBP19.71■□□□□ 0.75
LMNA-208ENST00000448611 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.71■□□□□ 0.75
LMNA-208ENST00000448611 NIPA1Q7RTP0 329 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 KRT26Q7Z3Y9 468 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 CCDC65Q8IXS2 484 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 GLIS3Q8NEA6 775 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 TUFT1Q9NNX1 390 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 RGL1Q9NZL6 768 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 R3HCC1Q9Y3T6 440 aaKnown RBP19.71■□□□□ 0.75
LMNA-208ENST00000448611 SNCAIPQ9Y6H5 919 aa19.71■□□□□ 0.75
LMNA-208ENST00000448611 IQCA1LA6NCM1 817 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 OAZ1P54368 228 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 ADKP55263 362 aaKnown RBP19.7■□□□□ 0.74
LMNA-208ENST00000448611 PABPC4Q13310 644 aaKnown RBP eCLIP19.7■□□□□ 0.741e-8■■■■□ 25.6
LMNA-208ENST00000448611 COG2Q14746 738 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 FAM26FQ5R3K3 315 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 CATSPERGQ6ZRH7 1159 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 CREBRFQ8IUR6 639 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 DCPSQ96C86 337 aaKnown RBP19.7■□□□□ 0.74
LMNA-208ENST00000448611 WDR11Q9BZH6 1224 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 RIPK3Q9Y572 518 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 IPO5O00410 1097 aaKnown RBP19.7■□□□□ 0.74
LMNA-208ENST00000448611 SLITRK3O94933 977 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 EPHX2P34913 555 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 VGLL4Q14135 290 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 SH3D19Q5HYK7 790 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 FOXR2Q6PJQ5 311 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 TAAR1Q96RJ0 339 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 RIT2Q99578 217 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 MAGEC2Q9UBF1 373 aaPredicted RBP19.7■□□□□ 0.74
LMNA-208ENST00000448611 UBIAD1Q9Y5Z9 338 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 PAPPA2Q9BXP8 1791 aa19.7■□□□□ 0.74
LMNA-208ENST00000448611 ADM5C9JUS6 153 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 CHMP2AO43633 222 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 EYA4O95677 639 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 MRPS9P82933 396 aaKnown RBP19.69■□□□□ 0.74
LMNA-208ENST00000448611 CACNB1Q02641 598 aaPredicted RBP19.69■□□□□ 0.74
LMNA-208ENST00000448611 RBL2Q08999 1139 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 LRRC41Q15345 812 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 CEP135Q66GS9 1140 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 RNF207Q6ZRF8 634 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 SULF1Q8IWU6 871 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 TEKT3Q9BXF9 490 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 FGFBP2Q9BYJ0 223 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 UNC45AQ9H3U1 944 aa19.69■□□□□ 0.74
LMNA-208ENST00000448611 ZNF214Q9UL59 606 aaPredicted RBP19.69■□□□□ 0.74
LMNA-208ENST00000448611 LGALS16A8MUM7 142 aa19.68■□□□□ 0.74
LMNA-208ENST00000448611 AKR1B15C9JRZ8 316 aaPredicted RBP19.68■□□□□ 0.74
LMNA-208ENST00000448611 MAP3K9P80192 1104 aa19.68■□□□□ 0.74
LMNA-208ENST00000448611 LRRC63Q05C16 580 aa19.68■□□□□ 0.74
LMNA-208ENST00000448611 GIT2Q14161 759 aa19.68■□□□□ 0.74
LMNA-208ENST00000448611 CTTNQ14247 550 aaKnown RBP19.68■□□□□ 0.74
LMNA-208ENST00000448611 FAM114A1Q8IWE2 563 aa19.68■□□□□ 0.74
LMNA-208ENST00000448611 MYOCDQ8IZQ8 938 aa19.68■□□□□ 0.74
LMNA-208ENST00000448611 ZNF507Q8TCN5 953 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms