RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TMTC2Q8N394 836 aa9.99□□□□□ -0.81
SMC6-207ENST00000448223 CUL5Q93034 780 aa9.99□□□□□ -0.81
SMC6-207ENST00000448223 NUDCD1Q96RS6 583 aa9.99□□□□□ -0.81
SMC6-207ENST00000448223 KRT23Q9C075 422 aa9.99□□□□□ -0.81
SMC6-207ENST00000448223 CARD9Q9H257 536 aa9.99□□□□□ -0.81
SMC6-207ENST00000448223 GYG2O15488 501 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 TEX33O43247 280 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ARHGAP22Q7Z5H3 698 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 LONP2Q86WA8 852 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 PALM2Q8IXS6 379 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ENGASEQ8NFI3 743 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 KRT12Q99456 494 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ASCC2Q9H1I8 757 aaPredicted RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 ZBTB1Q9Y2K1 713 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 NEDD4P46934 1319 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ZPR1O75312 459 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 TFRCP02786 760 aaKnown RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 RPL13P26373 211 aaKnown RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 ECE1P42892 770 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ANTXR2P58335 489 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 PDE4BQ07343 736 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 DCAF17Q5H9S7 520 aaPredicted RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 NUGGCQ68CJ6 796 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 TRIM56Q9BRZ2 755 aaKnown RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 CHMP2BQ9UQN3 213 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 PXDNQ92626 1479 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 GMNCA6NCL1 334 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 SLFN14P0C7P3 912 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 UQCRFS1P1P0C7P4 283 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 KRT4P19013 534 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 CASP14P31944 242 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 MAN1A1P33908 653 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 PAPOLAP51003 745 aaKnown RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 PDE6CP51160 858 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 FLOT2Q14254 428 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 TMEM259Q4ZIN3 620 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 AKNAD1Q5T1N1 836 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 EMBQ6PCB8 327 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ANO5Q75V66 913 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 ZNF654Q8IZM8 581 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ZNF444Q8N0Y2 327 aaPredicted RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 KRT82Q9NSB4 513 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 ORC6Q9Y5N6 252 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 PARP1P09874 1014 aaKnown RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 SERPINB4P48594 390 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 CTCFP49711 727 aaPredicted RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 HDAC4P56524 1084 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 DAB2P98082 770 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 CAVIN4Q5BKX8 364 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 SFMBT2Q5VUG0 894 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 C2CD5Q86YS7 1000 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 TTC1Q99614 292 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 EHD2Q9NZN4 543 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 MAN1B1Q9UKM7 699 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 CAPN11Q9UMQ6 739 aa9.98□□□□□ -0.81
SMC6-207ENST00000448223 EPN1Q9Y6I3 576 aaPredicted RBP9.98□□□□□ -0.81
SMC6-207ENST00000448223 ZMYM6O95789 1325 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 MAGEB6P1A0A0J9YX57 407 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 ABCD1P33897 745 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 ASPHQ12797 758 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 PTPROQ16827 1216 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 NLRP14Q86W24 1093 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 LCORLQ8N3X6 602 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 SERPINI1Q99574 410 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 SIKE1Q9BRV8 207 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 IMPG2Q9BZV3 1241 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 PAPOLBQ9NRJ5 636 aaKnown RBP9.97□□□□□ -0.81
SMC6-207ENST00000448223 ANKARQ7Z5J8 1434 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 KCNA3P22001 575 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 RIC8AQ9NPQ8 531 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 BTG4Q9NY30 223 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 TRAF3IP3Q9Y228 551 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 UTYO14607 1347 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 KRT7P08729 469 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 ADCY8P40145 1251 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 IL1RL1Q01638 556 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 EP400NLQ6ZTU2 488 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 TRIM42Q8IWZ5 723 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 RNF169Q8NCN4 708 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 OSBPL5Q9H0X9 879 aaPredicted RBP9.97□□□□□ -0.81
SMC6-207ENST00000448223 NDE1Q9NXR1 346 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 GOLGA8QA0A0J9YX86 632 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 GOLGA8OA6NCC3 632 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 GOLGA8NF8WBI6 632 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 EXOC5O00471 708 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 EIF3BP55884 814 aaKnown RBP9.97□□□□□ -0.81
SMC6-207ENST00000448223 RBL2Q08999 1139 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 TCP11X2Q5H9J9 407 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 MB21D2Q8IYB1 491 aaPredicted RBP9.97□□□□□ -0.81
SMC6-207ENST00000448223 LZICQ8WZA0 190 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 TMEM87BQ96K49 555 aa9.97□□□□□ -0.81
SMC6-207ENST00000448223 AFG3L2Q9Y4W6 797 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms