RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 HERC4Q5GLZ8 1057 aaPredicted RBP21.68■■□□□ 1.06
FAM3A-215ENST00000447601 HOOK2Q96ED9 719 aa21.68■■□□□ 1.06
FAM3A-215ENST00000447601 CAPN11Q9UMQ6 739 aa21.68■■□□□ 1.06
FAM3A-215ENST00000447601 LUC7L2Q9Y383 392 aaKnown RBP21.68■■□□□ 1.06
FAM3A-215ENST00000447601 LRRC41Q15345 812 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 MIIPQ5JXC2 388 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 LRCH2Q5VUJ6 765 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 MCF2L2Q86YR7 1114 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 OR8K1Q8NGG5 319 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 SLC5A5Q92911 643 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 IQCDQ96DY2 449 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 AGBL1Q96MI9 1066 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 EIF2AK1Q9BQI3 630 aaKnown RBP21.67■■□□□ 1.06
FAM3A-215ENST00000447601 DESI2Q9BSY9 194 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 DNAI1Q9UI46 699 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 PCDHA2Q9Y5H9 948 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 ADGRG1Q9Y653 693 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 ZNF536O15090 1300 aa21.67■■□□□ 1.06
FAM3A-215ENST00000447601 ASTN2O75129 1339 aaPredicted RBP21.67■■□□□ 1.06
FAM3A-215ENST00000447601 TTC26A0AVF1 554 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 PSMD10O75832 226 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 USP14P54578 494 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 PPP2R5CQ13362 524 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 ZCWPW2Q504Y3 356 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 ARSHQ5FYA8 562 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 LRRC55Q6ZSA7 311 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 OTOP1Q7RTM1 612 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 GLIS3Q8NEA6 775 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 ERGIC2Q96RQ1 377 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 L2HGDHQ9H9P8 463 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 TUFT1Q9NNX1 390 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 PNMA2Q9UL42 364 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 NPHP3-ACAD11A0A0J9YXS1 232 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 RNF225M0QZC1 329 aaPredicted RBP21.66■■□□□ 1.06
FAM3A-215ENST00000447601 MEIS1O00470 390 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 PRELPP51888 382 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 FKBP3Q00688 224 aaKnown RBP21.66■■□□□ 1.06
FAM3A-215ENST00000447601 PABPC4Q13310 644 aaKnown RBP eCLIP21.66■■□□□ 1.066e-7■■■□□ 16
FAM3A-215ENST00000447601 TSR1Q2NL82 804 aaKnown RBP21.66■■□□□ 1.06
FAM3A-215ENST00000447601 TSC1Q92574 1164 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 DNAJC7Q99615 494 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 TANGO6Q9C0B7 1094 aa21.66■■□□□ 1.06
FAM3A-215ENST00000447601 EML1O00423 815 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 GAS7O60861 476 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 EYA4O95677 639 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 PSMC6P62333 389 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 RBM10P98175 930 aaKnown RBP21.65■■□□□ 1.06
FAM3A-215ENST00000447601 GHRHRQ02643 423 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 CYP4A11Q02928 519 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 MAN2A1Q16706 1144 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 VWA3BQ502W6 1294 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 NBPF12Q5TAG4 269 aaPredicted RBP21.65■■□□□ 1.06
FAM3A-215ENST00000447601 KRT26Q7Z3Y9 468 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 MTERF4Q7Z6M4 381 aaKnown RBP21.65■■□□□ 1.06
FAM3A-215ENST00000447601 APOBEC3FQ8IUX4 373 aaKnown RBP21.65■■□□□ 1.06
FAM3A-215ENST00000447601 WDR11Q9BZH6 1224 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 SLC38A10Q9HBR0 1119 aa21.65■■□□□ 1.06
FAM3A-215ENST00000447601 TRIM21P19474 475 aaKnown RBP21.64■■□□□ 1.06
FAM3A-215ENST00000447601 MUTP22033 750 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 ERVK-24P63145 666 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 UBXN2AP68543 259 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 GIT2Q14161 759 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 FIGNQ5HY92 759 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 CEP63Q96MT8 703 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 HSD17B14Q9BPX1 270 aa21.64■■□□□ 1.06
FAM3A-215ENST00000447601 ZNF541Q9H0D2 1346 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 VCAM1P19320 739 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 CACNB1Q02641 598 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-215ENST00000447601 MTMR2Q13614 643 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 SCYL3Q8IZE3 742 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 SAMD3Q8N6K7 520 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 CLEC4DQ8WXI8 215 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 PCMTD1Q96MG8 357 aaPredicted RBP21.64■■□□□ 1.05
FAM3A-215ENST00000447601 ZNF577Q9BSK1 485 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 TTYH3Q9C0H2 523 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 NDST4Q9H3R1 872 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 ZHX3Q9H4I2 956 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 MAP3K20Q9NYL2 800 aaKnown RBP21.64■■□□□ 1.05
FAM3A-215ENST00000447601 TBC1D7Q9P0N9 293 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 PPP1R9AQ9ULJ8 1098 aa21.64■■□□□ 1.05
FAM3A-215ENST00000447601 RPTORQ8N122 1335 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 FLOT1O75955 427 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 SLU7O95391 586 aaKnown RBP21.63■■□□□ 1.05
FAM3A-215ENST00000447601 FDX1P10109 184 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 RAD51AP2Q09MP3 1159 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 PPP4R3CPQ6ZMV5 832 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 MAP7D2Q96T17 732 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 REEP2Q9BRK0 252 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 MXRA8Q9BRK3 442 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 BHMT2Q9H2M3 363 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 AS3MTQ9HBK9 375 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 EMILIN3Q9NT22 766 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 ZNF112Q9UJU3 913 aa21.63■■□□□ 1.05
FAM3A-215ENST00000447601 CTDP1Q9Y5B0 961 aaPredicted RBP21.63■■□□□ 1.05
FAM3A-215ENST00000447601 A0A1W2PQJ5 194 aa21.62■■□□□ 1.05
FAM3A-215ENST00000447601 GNA14O95837 355 aa21.62■■□□□ 1.05
FAM3A-215ENST00000447601 GNG11P61952 73 aa21.62■■□□□ 1.05
FAM3A-215ENST00000447601 ZBED6P86452 979 aa21.62■■□□□ 1.05
FAM3A-215ENST00000447601 SCFD1Q8WVM8 642 aa21.62■■□□□ 1.05
FAM3A-215ENST00000447601 ERO1AQ96HE7 468 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms