RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RAB20Q9NX57 234 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ZAP70P43403 619 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 SKOR1P84550 965 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 FKBP3Q00688 224 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 PRRC2BQ5JSZ5 2229 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 TBC1D23Q9NUY8 699 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ZNF532Q9HCE3 1301 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 A0A1W2PQC6 194 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 HARSP12081 509 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 BFSP1Q12934 665 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 PDXDC1Q6P996 788 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 SNX29Q8TEQ0 813 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 OSBP2Q969R2 916 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 TMBIM4Q9HC24 238 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ASAP2O43150 1006 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 DDAH1O94760 285 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 GFPT2O94808 682 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 MESDQ14696 234 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 FAM47EQ6ZV65 393 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 MYH10P35580 1976 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 ZNF233A6NK53 670 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 GYPCP04921 128 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 LDHCP07864 332 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 SCG2P13521 617 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 PECAM1P16284 738 aaPredicted RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 HSPA9P38646 679 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 AP2B1P63010 937 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 PHEXP78562 749 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 BLIDQ8IZY5 108 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 DIS3Q9Y2L1 958 aaKnown RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 IQGAP2Q13576 1575 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 MED23Q9ULK4 1368 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 LIN7AO14910 233 aaPredicted RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 COL23A1Q86Y22 540 aaPredicted RBP8.51□□□□□ -1.05
SMG1-202ENST00000446231 UIMC1Q96RL1 719 aa8.51□□□□□ -1.05
SMG1-202ENST00000446231 AGTP01019 485 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 SERPINB3P29508 390 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 MMEL1Q495T6 779 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 PRR16Q569H4 304 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 CXorf38Q8TB03 319 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 ESRRAP11474 423 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 FAM43BQ6ZT52 329 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 SPATA5Q8NB90 893 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 EPS15L1Q9UBC2 864 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 GGA2Q9UJY4 613 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 LAD1O00515 517 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 SYF2O95926 243 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 ISCUQ9H1K1 167 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 PPP1R1BQ9UD71 204 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 PHF8Q9UPP1 1060 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 CIAO1O76071 339 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 GHRP10912 638 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 NFATC2IPQ8NCF5 419 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 BSDC1Q9NW68 430 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 TRAPPC3O43617 180 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 LRRC14Q15048 493 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 DCUN1D2Q6PH85 259 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 TTC1Q99614 292 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 TMCC1O94876 653 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 BZW1Q7L1Q6 419 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 IP6K1Q92551 441 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 CHMP2BQ9UQN3 213 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 EXOC1LA0A1B0GW35 172 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 EEF1DP29692 281 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 SLC4A8Q2Y0W8 1093 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 PAPD7Q5XG87 772 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 TMCO4Q5TGY1 634 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 MTO1Q9Y2Z2 717 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 TBX2Q13207 712 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 LRRC43Q8N309 656 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 CRELD2Q6UXH1 353 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 TRMT10CQ7L0Y3 403 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 IFNL3Q8IZI9 196 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 AFAP1L2Q8N4X5 818 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 KIF28PB7ZC32 967 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 MMP1P03956 469 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 SERPINB4P48594 390 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 GPBP1Q86WP2 473 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 ICA1LQ8NDH6 482 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 RPGRQ92834 1020 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 ATP6V1G2O95670 118 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 TRABDQ9H4I3 376 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 ADAMTS1Q9UHI8 967 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 IFNAR1P17181 557 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 PGM1P36871 562 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 FXR1P51114 621 aaKnown RBP eCLIP8.5□□□□□ -1.055e-6■■□□□ 13.8
SMG1-202ENST00000446231 ROR2Q01974 943 aaKnown RBP8.5□□□□□ -1.05
SMG1-202ENST00000446231 FAM129AQ9BZQ8 928 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 TMOD3Q9NYL9 352 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 C2CD2Q9Y426 696 aa8.5□□□□□ -1.05
SMG1-202ENST00000446231 KDM5BQ9UGL1 1544 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms