RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PSMD1Q99460 953 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 NAA15Q9BXJ9 866 aaKnown RBP18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 IKZF4Q9H2S9 585 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 PVALEFA0A1B0GWK0 134 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 RASSF10A6NK89 507 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 CYP11B2P19099 503 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 FAM114A1Q8IWE2 563 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 NT5C3AQ9H0P0 336 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 EPN1Q9Y6I3 576 aaPredicted RBP18.66■□□□□ 0.58
LAPTM4B-201ENST00000445593 ENC1O14682 589 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 MYOZ2Q9NPC6 264 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 NLRC4Q9NPP4 1024 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 GREB1LQ9C091 1923 aaPredicted RBP18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 GOLGA6L9A6NEM1 432 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 CIAPIN1Q6FI81 312 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 WDR59Q6PJI9 974 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 SH2D3AQ9BRG2 576 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 GLT8D2Q9H1C3 349 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 NDST4Q9H3R1 872 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 NDUFA10O95299 355 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 INPP5BP32019 993 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 SREBF1P36956 1147 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 RASSF7Q02833 373 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 ARSHQ5FYA8 562 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 ZNF771Q7L3S4 317 aaPredicted RBP18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 MAEAQ7L5Y9 396 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 SLFN12Q8IYM2 578 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 GUF1Q8N442 669 aaKnown RBP18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 TSG101Q99816 390 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 WDR18Q9BV38 432 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
LAPTM4B-201ENST00000445593 ABCB11O95342 1321 aa18.64■□□□□ 0.58
LAPTM4B-201ENST00000445593 KDM3AQ9Y4C1 1321 aa18.64■□□□□ 0.58
LAPTM4B-201ENST00000445593 PCNTO95613 3336 aa18.64■□□□□ 0.58
LAPTM4B-201ENST00000445593 CAP2P40123 477 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 PPP2R3AQ06190 1150 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 CCDC65Q8IXS2 484 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 VCPKMTQ9H867 229 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 REXO2Q9Y3B8 237 aaKnown RBP18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 ARID5AQ03989 594 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 SPIRE1Q08AE8 756 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 TRIM14Q14142 442 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 C10orf71Q711Q0 1435 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 NOC3LQ8WTT2 800 aaKnown RBP18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 CCDC51Q96ER9 411 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 REEP2Q9BRK0 252 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 DNM3Q9UQ16 869 aa18.64■□□□□ 0.57
LAPTM4B-201ENST00000445593 GCOM1H8Y6P7 765 aaPredicted RBP18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 PRPF6O94906 941 aaKnown RBP18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 POLR2MP0CAP2 368 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 VWA3BQ502W6 1294 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 KIAA1328Q86T90 577 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 CCDC94Q9BW85 323 aaPredicted RBP18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 PRKG1Q13976 671 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 MACROD2A1Z1Q3 448 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 LRCH2Q5VUJ6 765 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 RUSC1Q9BVN2 902 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 ZNHIT6Q9NWK9 470 aaKnown RBP18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 CCPG1Q9ULG6 757 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 DUSP10Q9Y6W6 482 aa18.63■□□□□ 0.57
LAPTM4B-201ENST00000445593 ALAS1P13196 640 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 POLD1P28340 1107 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 KCNA1Q09470 495 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 PLS1Q14651 629 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 LRRC55Q6ZSA7 311 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 RRAGAQ7L523 313 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 ERMNQ8TAM6 284 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 SCFD1Q8WVM8 642 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 EIF2AK1Q9BQI3 630 aaKnown RBP18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 EMILIN3Q9NT22 766 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 ARFGEF1Q9Y6D6 1849 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 A0A1W2PQC6 194 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 DRC1Q96MC2 740 aa18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 PURBQ96QR8 312 aaKnown RBP18.62■□□□□ 0.57
LAPTM4B-201ENST00000445593 NFIBO00712 420 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 FOSP01100 380 aaPredicted RBP18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 MYBP10242 640 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 ARP10275 920 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 SLC12A3P55017 1021 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CCDC122Q5T0U0 273 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CHURC1Q8WUH1 139 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CRYGNQ8WXF5 182 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 HOOK2Q96ED9 719 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 DYDC2Q96IM9 177 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 LRRC27Q9C0I9 530 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 NHEJ1Q9H9Q4 299 aaPredicted RBP18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 RAVER2Q9HCJ3 691 aaKnown RBP18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 HDAC6Q9UBN7 1215 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms